Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_021299.1 Length=80955 Score E Sequences producing significant alignments: (Bits) Value seq9491 834 0.0 >seq9491 Length=867449 Score = 834 bits (924), Expect = 0.0 Identities = 753/942 (80%), Gaps = 10/942 (1%) Strand=Plus/Minus Query 59266 GCCATCAACTGGAACCGCGTCTTTGACGACAAGGATCTTGAGGTCTGGAACCGGTTGACC 59325 || |||||||||||||| || ||||| ||||| || ||||| ||| |||| | | Sbjct 88535 GCGATCAACTGGAACCGTCTCGAGGACGAGAAGGACCTCGAGGTGTGGGACCGCCTCGTC 88476 Query 59326 AACAACTTCTGGCTGCCAGAGAAGATCCCTGTCTCCAACGACATCCCGGCCTGGGGCACG 59385 |||||||||||||| ||||| | || || || |||||||||| | | ||| |||| Sbjct 88475 GGGAACTTCTGGCTGCCCGAGAAAGTGCCGGTGTCGAACGACATCCAGTCGTGGAACACG 88416 Query 59386 CTGACGGAGGAAGAGCAAGTCCTCACGATGCGGGTCTTCACCGGCCTGACGATGCTCGAC 59445 || || | | | ||||| | ||||||||||| || ||||||||||||||| |||| ||| Sbjct 88415 CTCACCGCGCAGGAGCAGGAGCTCACGATGCGCGTATTCACCGGCCTGACGCTGCTGGAC 88356 Query 59446 ACGATCCAGGGCACCGTGGGTGCTGTGAGCCTGATCCCTGACGCGATCACGCCGCACGAG 59505 |||||||||||||| || || || ||| || ||||| ||||||||||||||||||||| Sbjct 88355 ACGATCCAGGGCACGGTCGGCGCGGTGTCGCTCATCCCCGACGCGATCACGCCGCACGAG 88296 Query 59506 GAGGCGGTGTACACGAACATCGCGTTCATGGAGTCGGTGCACGCGAAGAGCTACAGCAAC 59565 || ||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 88295 GAAGCGGTGTACACCAACATCGCGTTCATGGAGTCGGTGCACGCCAAGAGCTACTCGTCG 88236 Query 59566 ATCTTCTCGACGCTGTGCTCGTCCAAGGAGATCGACGCGGCGTTCCGCTGGTCGGAGGAG 59625 |||||||||||||||||||| | |||||||||| ||||||||||||||||||||| Sbjct 88235 ATCTTCTCGACGCTGTGCTCCACTCGTGAGATCGACGACGCGTTCCGCTGGTCGGAGGAG 88176 Query 59626 AATCCGAACCTGCAACGCAAGGCTCAGATCGTCCTGGACTACTACCAGGGTGACGATCCG 59685 || |||||||| || |||||||| |||||||| ||||||||||| |||| ||| ||| Sbjct 88175 AACCCGAACCTCCAGCGCAAGGCCGAGATCGTCATGGACTACTACAAGGGCGACTCGCCG 88116 Query 59686 CTGAAGCGGAAGGTGGCCTCGACGTTGCTGGAGGGGTTCCTGTTCTACTCGGGCTTCTAC 59745 || ||||| ||||| || ||| |||| ||| ||||| |||||||| ||||||||| Sbjct 88115 CTCAAGCGCAAGGTCGCGAGCACGCTGCTCGAGTCATTCCTCTTCTACTCCGGCTTCTAC 88056 Query 59746 CTGCCGATGTACTGGTCTAGTCGGGGG--AAGCTGACGAACACGGCCGACATGATCCGGC 59803 ||||||||||||||||| |||| | | ||||||||||||||||||||| | ||||| | Sbjct 88055 CTGCCGATGTACTGGTC--GTCGCGCGCCAAGCTGACGAACACGGCCGACCTCATCCGCC 87998 Query 59804 TCATCATTCGTGACGAGGCGGTGCACGGCTACTACATCGGATACAAGTTCCAGCGCGGCC 59863 ||||||| || |||||||| |||||||| ||||||||||| |||||||||||| || | Sbjct 87997 TCATCATCCGCGACGAGGCCGTGCACGGGTACTACATCGGCTACAAGTTCCAGAAGGGTC 87938 Query 59864 TGGAGA--CTCAGAAC-GAGGCTCGCCGCGAGGAGCTGAAGGACTACACGTACGGTCTGC 59920 | |||| ||| | |||| ||||| ||||| |||| ||||||| || |||| Sbjct 87937 TCGAGAAGCTCTCCCCGGAGG---AGCGCGACGAGCTCAAGGCGTACACGTTCGAGCTGC 87881 Query 59921 TACTCGAGTTGTACGACAACGAGATTGAGTACACGCAGGATCTGTACGACGGCGTGGGAC 59980 | ||||| ||||||| |||||| | |||||||| |||| || ||||||||||| || | Sbjct 87880 TCTTCGAGCTGTACGAGAACGAGGTGCAGTACACGGAGGACCTCTACGACGGCGTCGGGC 87821 Query 59981 TGACTGAGGATGTCAAGATGTTCCTGCGCTACAACGCCAACAAGGCGCTGATGAATCTCG 60040 |||| ||||| ||||||| ||||||||| |||||||||||||||||||| ||||| |||| Sbjct 87820 TGACCGAGGACGTCAAGAAGTTCCTGCGGTACAACGCCAACAAGGCGCTCATGAACCTCG 87761 Query 60041 GCTACGAGGCGCTGTTCCCGCGCGACGAAACCGAGGTGAATGCGGCGATCTTGGCGGCAC 60100 ||||||||||||| ||||| ||||| ||||| || || |||||||| | |||| | Sbjct 87760 GCTACGAGGCGCTCTTCCCCAAGGACGAGACCGACGTCAACCCGGCGATCCTCTCGGCGC 87701 Query 60101 TGTCCCCTGGCGGGGACGAGAACCACGACTTCTTCTCGGGCTCTGGCAGCACGTATGTGA 60160 |||| || || ||||||||||||||||||||||| || || ||| |||| || | Sbjct 87700 TGTCGCCGAACGCCGACGAGAACCACGACTTCTTCTCCGGGTCCGGCTCGTCGTACGTCA 87641 Query 60161 TTGGCAAGGCTGAGGTTACGGAAGACGAGGATTGGGACTTCT 60202 | |||||||| | | || || ||||| || |||||||||| Sbjct 87640 TCGGCAAGGCCGTGAACACCGAGGACGACGACTGGGACTTCT 87599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 258901245867792