Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_021347.1 Length=142563 Score E Sequences producing significant alignments: (Bits) Value seq17 178 1e-39 >seq17 Length=237104 Score = 178 bits (196), Expect = 1e-39 Identities = 213/289 (74%), Gaps = 3/289 (1%) Strand=Plus/Plus Query 105035 CTTCGCCGGGTACTTCAACGTCGTCGCCGACTACACCAAGTGGGCTAAGGACC---GCAT 105091 |||| | ||||||||| ||| |||||||||| || ||| ||||| ||||||| |||| Sbjct 190432 CTTCCCGGGGTACTTCCTCGTGGTCGCCGACTTCATCAACTGGGCCAAGGACCAGGGCAT 190491 Query 105092 GCTCGTCGGTCCCGGCCGTGGTTCGGCCGGTGGCTCGCTCGTCTCGTACCTGATGGACAT 105151 | |||||| || |||||||| ||||||| ||||| | | ||| ||||| |||| ||| Sbjct 190492 CCGCGTCGGCCCGGGCCGTGGCTCGGCCGCGGGCTCCATGGCCTCCTACCTCATGGGCAT 190551 Query 105152 CACCGAGCTCGACCCGATCAAGTACGACCTGATGTTCGAGCGGTTCATCTCGCCGGAGCG 105211 |||||||||||||||| | || ||| ||||| |||||||||||| || || ||||| Sbjct 190552 CACCGAGCTCGACCCGCTGGAGCACGGGCTGATCTTCGAGCGGTTCCTCAACCCCGAGCG 190611 Query 105212 GAAGAACTTCCCCGACATCGATCTCGACTTCCCGCAGAAGCGTCGCGGCGAGGTCGTCGA 105271 | | |||||| |||| |||||||| || || ||||| |||||| || Sbjct 190612 TGTGTCGATGCCCGACGTCGACGTCGACTTCGACGAGCGTCGGCGCGGGGAGGTCATCCG 190671 Query 105272 CTACATCGCCGACCGCTACGGCCACGACTGCGTCTGCTCGATCGGCACC 105320 ||| || | || |||||| ||||| ||||| | ||||| |||| Sbjct 190672 GTACGTCACGGAGAAGTACGGCGACGACCGCGTCGCCCAGATCGTCACC 190720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 456019486867360