Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq9491 201 1e-45 seq9384 120 4e-21 >seq9491 Length=867449 Score = 201 bits (222), Expect = 1e-45 Identities = 596/896 (67%), Gaps = 45/896 (5%) Strand=Plus/Minus Query 1726373 CCCTCGACCAGAAAACTCTCGATCATGACGCCCCTGATATGG-GCACACCCGCTGCGGAT 1726431 ||| | || || || ||||| ||||||| |||| |||| || | ||| | || | Sbjct 783057 CCCGCCACGAGGAAGCTCTCCATCATGAGGCCCGTGATGCCCTGCTCGCCCTCGGCC-AG 782999 Query 1726432 CTGACCGGCGACGTCGCGCACGACGTCGGCCTGCCGGCGGTGGTCCTTGCCCGAGTTGTC 1726491 | | ||| ||| ||||||||||| || ||||| || |||| |||||| |||||| | Sbjct 782998 CCGCGCGGAGACCTCGCGCACGACCTCCGCCTGGCGCACGTGGCTCTTGCCGGAGTTGCC 782939 Query 1726492 GTGCGAGCAGTCGACGACCACGGCCG-GCGGCGGGTCCATGCGGCGCGCCAC------CG 1726544 |||||| ||||||||| | | ||| || || | || || ||| || || Sbjct 782938 GTGCGACGCGTCGACGACGA-GCCCGTGCTCCGTGACCCCGCCGCGGCCCGAGGTGCGCG 782880 Query 1726545 CGGCAGCGANNNNNNNNNNNNNNNNNNNNGCGTCAAAGTTGGGCCGGCCGGGCGACC--C 1726602 || | |||| || | ||||||| | ||| ||| || | Sbjct 782879 CGACCGCGAGCGCCGCCGCGACGTCGTCGGCCCCGTAGTTGGGGC--CCGAGCGCCCGCC 782822 Query 1726603 GCGCAGCACAATGTGCCCGTCGGCGTTGCCGGCGCTGTGGCAGGGGGCCGCGCGCCCGTC 1726662 |||||| | | ||| | ||||| |||||| ||| | | || ||| || || ||| Sbjct 782821 GCGCAGGATGACGTGGCAGTCGGGGTTGCCCGCGGTCTCCACGGCGGCGGCCCGGCCGAG 782762 Query 1726663 GCCGTCCA-GCCATAGAAAGGTATGCG-GCTGGGCGGCGGCGC-GCACGGCGTCGAGTGC 1726719 ||||| ||| |||| | | ||| ||| | || ||| | ||| | |||||| || Sbjct 782761 CGAGTCCATGCCGAAGAACG-TGTGCTCGCTCGCCG-CGGTGATGCA-GCCGTCGACCGC 782705 Query 1726720 CGTCGCCACGCTCCCGTCGGTGCCGTTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGC 1726779 || |||| |||||||| |||||||||| |||| || || | ||| |||| || Sbjct 782704 GATCTGCACGTCGCCGTCGGTCGCGTTCTTGAACCCGACGGGCATGGACAGGCCCGAGGC 782645 Query 1726780 CATCTCGCGGTGCACCTGGCTCTCGGTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAG 1726839 | || |||||||||||| ||||| |||||||||| | |||||||||| ||| Sbjct 782644 GAGCTGGCGGTGCACCTGCGACTCGGCGTTGCGCGCGCCGATCGCGCCCCACGACACGGC 782585 Query 1726840 GTCTGCCAAATAAGG-GGCCACCAGAGGACT-GAGAAACTCG-ACGGCCACGGGCTGATC 1726896 ||| || | || | || | | | | || ||| |||||| ||| ||| | | | Sbjct 782584 GTCGGCGATGTACTGCGGGCTC--GTCGGCTCGAGGAACTCGCACG----CGGCCGGGAC 782531 Query 1726897 GACGGCGACGACGAGATCGCGCAACAGG-CG-GCGCGACGCCGTCAGGCCGTCGGCCAGG 1726954 | ||||| ||| || || ||| || || |||||| || |||||||| | || | Sbjct 782530 GCCGGCGTCGAGGACGCCGAGCAGCACCTCGCGCGCGAGGCG--CAGGCCGTGGTGCACG 782473 Query 1726955 CGGCACGACCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGC 1727014 | |||||||||||||| |||||| || ||||||||||| || |||||||||||| Sbjct 782472 TCGTGCGACCCGTCGAGGTGCGGGTCGTTGATGAGGCCCTTCCAGCCCACGGTCGTGCGC 782413 Query 1727015 GGCTTTTCGACATAGGCGCGCATGACCACGCAAAGCGCGTCGCCGACCTCGTCTCGGACA 1727074 ||||| |||| ||| |||||||||| || || |||| ||| ||||| | | Sbjct 782412 GGCTTCTCGAAGTAGACGCGCATGACGACCATGAGGTCGTCCGCGAGCTCGT---GCGCG 782356 Query 1727075 AAGGCGCGCAGGCGTCGGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGA 1727134 | |||| |||||| | | || |||| ||||| | ||||||||| |||| || || Sbjct 782355 ACGGCGGCCAGGCGCCCCGCGTACTCGAGCGCGGCCTCGGGGTCGTGCACCGAGCAGGGG 782296 Query 1727135 CCAACGATAACCAGCAGCCGCCGGTCGGTCCCGTCGAGCACGCGCCTCACCTGGCGGCGT 1727194 || ||||| || || || || ||||| || |||| ||| | |||| |||||| Sbjct 782295 CCGACGATGACGAGGAGGCGGTGGTCGTCGCCCGCGAGAACGTCACGGACCTCGCGGCGC 782236 Query 1727195 G-CGTCGGCGACGCG--CGCGGCGCCTTGGGCACCGAGAGGGACGGCCTCGGCGAG 1727247 | ||||| | ||| | ||| |||| | || ||||| || | | |||||||| Sbjct 782235 GACGTCGTC-ACGAGGTCGCTGCGCGT--CGCGCCGAGGGGCAGG---TCGGCGAG 782186 >seq9384 Length=412 Score = 120 bits (132), Expect = 4e-21 Identities = 157/216 (73%), Gaps = 5/216 (2%) Strand=Plus/Plus Query 1726927 GCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGTCGCTGGC 1726986 |||||| || |||||||| | || | | |||||||||||||| |||||| || Sbjct 184 GCGCGAGGCG--CAGGCCGTGGTGCACGTCGTGCGACCCGTCGAGGTGCGGGTCGATGAT 241 Query 1726987 CAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGACCACGCA 1727046 ||||||||||| || ||||||||||||||||| |||| ||| |||||||||| || Sbjct 242 GAGGCCCTTCCAGCCCACGGTCGTGCGCGGCTTCTCGAAGTAGACGCGCATGACGACCAT 301 Query 1727047 AAGCGCGTCGCCGACCTCGTCTCGGACAAAGGCGCGCAGGCGTCGGCCATAGTCGACGAC 1727106 || |||| ||| ||||| | | | |||| |||||| | | || |||| | Sbjct 302 GAGGTCGTCCGCGAGCTCGT---GCGCGACGGCGTCCAGGCGCCCCGCGTACTCGAGCGC 358 Query 1727107 GGCCGCCGGGTCGTGCGCCGAACACGGACCAACGAT 1727142 |||||| ||||||||| ||| || || || ||||| Sbjct 359 GGCCGCGGGGTCGTGCACCGCGCAGGGGCCGACGAT 394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106360242028964