Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq9491 201 1e-45
seq9384 120 4e-21
>seq9491
Length=867449
Score = 201 bits (222), Expect = 1e-45
Identities = 596/896 (67%), Gaps = 45/896 (5%)
Strand=Plus/Minus
Query 1726373 CCCTCGACCAGAAAACTCTCGATCATGACGCCCCTGATATGG-GCACACCCGCTGCGGAT 1726431
||| | || || || ||||| ||||||| |||| |||| || | ||| | || |
Sbjct 783057 CCCGCCACGAGGAAGCTCTCCATCATGAGGCCCGTGATGCCCTGCTCGCCCTCGGCC-AG 782999
Query 1726432 CTGACCGGCGACGTCGCGCACGACGTCGGCCTGCCGGCGGTGGTCCTTGCCCGAGTTGTC 1726491
| | ||| ||| ||||||||||| || ||||| || |||| |||||| |||||| |
Sbjct 782998 CCGCGCGGAGACCTCGCGCACGACCTCCGCCTGGCGCACGTGGCTCTTGCCGGAGTTGCC 782939
Query 1726492 GTGCGAGCAGTCGACGACCACGGCCG-GCGGCGGGTCCATGCGGCGCGCCAC------CG 1726544
|||||| ||||||||| | | ||| || || | || || ||| || ||
Sbjct 782938 GTGCGACGCGTCGACGACGA-GCCCGTGCTCCGTGACCCCGCCGCGGCCCGAGGTGCGCG 782880
Query 1726545 CGGCAGCGANNNNNNNNNNNNNNNNNNNNGCGTCAAAGTTGGGCCGGCCGGGCGACC--C 1726602
|| | |||| || | ||||||| | ||| ||| || |
Sbjct 782879 CGACCGCGAGCGCCGCCGCGACGTCGTCGGCCCCGTAGTTGGGGC--CCGAGCGCCCGCC 782822
Query 1726603 GCGCAGCACAATGTGCCCGTCGGCGTTGCCGGCGCTGTGGCAGGGGGCCGCGCGCCCGTC 1726662
|||||| | | ||| | ||||| |||||| ||| | | || ||| || || |||
Sbjct 782821 GCGCAGGATGACGTGGCAGTCGGGGTTGCCCGCGGTCTCCACGGCGGCGGCCCGGCCGAG 782762
Query 1726663 GCCGTCCA-GCCATAGAAAGGTATGCG-GCTGGGCGGCGGCGC-GCACGGCGTCGAGTGC 1726719
||||| ||| |||| | | ||| ||| | || ||| | ||| | |||||| ||
Sbjct 782761 CGAGTCCATGCCGAAGAACG-TGTGCTCGCTCGCCG-CGGTGATGCA-GCCGTCGACCGC 782705
Query 1726720 CGTCGCCACGCTCCCGTCGGTGCCGTTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGC 1726779
|| |||| |||||||| |||||||||| |||| || || | ||| |||| ||
Sbjct 782704 GATCTGCACGTCGCCGTCGGTCGCGTTCTTGAACCCGACGGGCATGGACAGGCCCGAGGC 782645
Query 1726780 CATCTCGCGGTGCACCTGGCTCTCGGTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAG 1726839
| || |||||||||||| ||||| |||||||||| | |||||||||| |||
Sbjct 782644 GAGCTGGCGGTGCACCTGCGACTCGGCGTTGCGCGCGCCGATCGCGCCCCACGACACGGC 782585
Query 1726840 GTCTGCCAAATAAGG-GGCCACCAGAGGACT-GAGAAACTCG-ACGGCCACGGGCTGATC 1726896
||| || | || | || | | | | || ||| |||||| ||| ||| | | |
Sbjct 782584 GTCGGCGATGTACTGCGGGCTC--GTCGGCTCGAGGAACTCGCACG----CGGCCGGGAC 782531
Query 1726897 GACGGCGACGACGAGATCGCGCAACAGG-CG-GCGCGACGCCGTCAGGCCGTCGGCCAGG 1726954
| ||||| ||| || || ||| || || |||||| || |||||||| | || |
Sbjct 782530 GCCGGCGTCGAGGACGCCGAGCAGCACCTCGCGCGCGAGGCG--CAGGCCGTGGTGCACG 782473
Query 1726955 CGGCACGACCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGC 1727014
| |||||||||||||| |||||| || ||||||||||| || ||||||||||||
Sbjct 782472 TCGTGCGACCCGTCGAGGTGCGGGTCGTTGATGAGGCCCTTCCAGCCCACGGTCGTGCGC 782413
Query 1727015 GGCTTTTCGACATAGGCGCGCATGACCACGCAAAGCGCGTCGCCGACCTCGTCTCGGACA 1727074
||||| |||| ||| |||||||||| || || |||| ||| ||||| | |
Sbjct 782412 GGCTTCTCGAAGTAGACGCGCATGACGACCATGAGGTCGTCCGCGAGCTCGT---GCGCG 782356
Query 1727075 AAGGCGCGCAGGCGTCGGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGA 1727134
| |||| |||||| | | || |||| ||||| | ||||||||| |||| || ||
Sbjct 782355 ACGGCGGCCAGGCGCCCCGCGTACTCGAGCGCGGCCTCGGGGTCGTGCACCGAGCAGGGG 782296
Query 1727135 CCAACGATAACCAGCAGCCGCCGGTCGGTCCCGTCGAGCACGCGCCTCACCTGGCGGCGT 1727194
|| ||||| || || || || ||||| || |||| ||| | |||| ||||||
Sbjct 782295 CCGACGATGACGAGGAGGCGGTGGTCGTCGCCCGCGAGAACGTCACGGACCTCGCGGCGC 782236
Query 1727195 G-CGTCGGCGACGCG--CGCGGCGCCTTGGGCACCGAGAGGGACGGCCTCGGCGAG 1727247
| ||||| | ||| | ||| |||| | || ||||| || | | ||||||||
Sbjct 782235 GACGTCGTC-ACGAGGTCGCTGCGCGT--CGCGCCGAGGGGCAGG---TCGGCGAG 782186
>seq9384
Length=412
Score = 120 bits (132), Expect = 4e-21
Identities = 157/216 (73%), Gaps = 5/216 (2%)
Strand=Plus/Plus
Query 1726927 GCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGTCGCTGGC 1726986
|||||| || |||||||| | || | | |||||||||||||| |||||| ||
Sbjct 184 GCGCGAGGCG--CAGGCCGTGGTGCACGTCGTGCGACCCGTCGAGGTGCGGGTCGATGAT 241
Query 1726987 CAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGACCACGCA 1727046
||||||||||| || ||||||||||||||||| |||| ||| |||||||||| ||
Sbjct 242 GAGGCCCTTCCAGCCCACGGTCGTGCGCGGCTTCTCGAAGTAGACGCGCATGACGACCAT 301
Query 1727047 AAGCGCGTCGCCGACCTCGTCTCGGACAAAGGCGCGCAGGCGTCGGCCATAGTCGACGAC 1727106
|| |||| ||| ||||| | | | |||| |||||| | | || |||| |
Sbjct 302 GAGGTCGTCCGCGAGCTCGT---GCGCGACGGCGTCCAGGCGCCCCGCGTACTCGAGCGC 358
Query 1727107 GGCCGCCGGGTCGTGCGCCGAACACGGACCAACGAT 1727142
|||||| ||||||||| ||| || || || |||||
Sbjct 359 GGCCGCGGGGTCGTGCACCGCGCAGGGGCCGACGAT 394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106360242028964
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |