Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_022059.1 Length=77367 Score E Sequences producing significant alignments: (Bits) Value seq17 412 2e-110 seq1 168 3e-37 >seq17 Length=237104 Score = 412 bits (456), Expect = 2e-110 Identities = 570/796 (72%), Gaps = 9/796 (1%) Strand=Plus/Plus Query 67567 CATTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGG 67626 ||| ||||| ||||| || || |||||| ||| ||||||||||| || ||| | || Sbjct 124039 CATCCCCACGGGCTCCATCGCGCTGGACATCGCGCTCGGCATCGGCGGCCTGCCGCGCGG 124098 Query 67627 CCGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGC 67686 || || | ||| | ||||| || ||||| || || ||| | || || |||||||| Sbjct 124099 GCGCGTCATCGAGGTGTACGGCCCGGAGTCCTCCGGAAAGACGACCGTGGCGCTCCACGC 124158 Query 67687 GGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCT 67746 ||||||| |||||| ||||| |||| ||| || | |||||||||||| || | || Sbjct 124159 CGTGGCCAGCGCCCAGCGCGCCGGCGGCATCGCGGCGTTCATCGACGCCGAGCACGCACT 124218 Query 67747 CGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCC 67806 |||||| ||||||||| | |||||| || || |||| || | || ||||| Sbjct 124219 CGACCCGGAGTACGCCAAGAAGCTCGGCGTCGACACCGACGCCCTGCTCGTCTCCCAGCC 124278 Query 67807 AGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTC 67866 ||||| || |||||||| || |||||| ||| | || || || |||| | | Sbjct 124279 GGACACGGGGGAGCAGGCGCTCGAGATCACGGACATGCTGATCCGCTCGGGCGCGCTCGA 124338 Query 67867 CATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACAT 67926 ||||||||| | ||||| || |||||||| ||||| ||||||| |||| || || || Sbjct 124339 CATCATCGTCATCGACTCCGTCGCGGCCCTCGTGCCCAAGGCGGAGATCGAGGGCGAGAT 124398 Query 67927 CGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGAC 67986 || ||| |||||||| || || |||||||| ||||| ||||| |||||||| | || Sbjct 124399 GGGCGACAGCCACGTCGGTCTCCAGGCCCGCCTCATGTCGCAGGCGCTGCGCAAGATCAC 124458 Query 67987 CGGCACGATTGCCAGC---ACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAA 68043 ||| || | |||| || |||| | || | | | || ||||| |||||||| Sbjct 124459 CGGTGCGCT---CAGCGCGTCCGGCACGACCGCCATCTTCATCAACCAGCTCCGCGAGAA 124515 Query 68044 GATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTT 68103 |||||| |||| || |||| | ||||| || |||||||| ||||| ||| || Sbjct 124516 GATCGG---CGTGTTCTTCGGCTCTCCCGAGACGACGACCGGTGGCAAGGCGCTGAAGTT 124572 Query 68104 CTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGC 68163 |||||||||||| ||| | || ||||| | |||| ||| ||||| ||| || || Sbjct 124573 CTACGCCTCGGTCCGTCTCGACATCCGCCGCATCGAGACCCTCAAGGAGGGCACCGACGC 124632 Query 68164 TGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCA 68223 ||||||||||| || ||||||||||| |||||||||||| ||||||| ||| | || Sbjct 124633 GGTCGGCAACCGGACCCGCGTGAAGGTCGTCAAGAACAAGATGGCGCCGCCGTTCAAGCA 124692 Query 68224 GGCTGAGTTTTCCATCGTCTACGGCGAGGGCATTTCCCGCGAGGCCGAACTCCTCGACAT 68283 ||| ||||| |||| ||||||| | ||||| |||||||||| | ||| ||||||| Sbjct 124693 GGCCGAGTTCGACATCCTCTACGGGGTCGGCATCTCCCGCGAGGGTGGCCTCATCGACAT 124752 Query 68284 GGCCGTTTCCCGAGGGCTCATCAAGAAGTCTGGGGCCTGGTTCAAGTACGGGGACAAGAA 68343 || ||| | ||| || | ||||| ||| | ||||||| ||||| | | | | Sbjct 124753 GGGCGTGGAGCACGGGTTCGTGCGCAAGTCCGGGTCGTGGTTCACCTACGGCGGCGACCA 124812 Query 68344 CATCGGCCAGGGCAAG 68359 |||| ||||||||| Sbjct 124813 GCTCGGGCAGGGCAAG 124828 >seq1 Length=1297082 Score = 168 bits (186), Expect = 3e-37 Identities = 223/309 (72%), Gaps = 13/309 (4%) Strand=Plus/Plus Query 60959 TCGGCACCCTGACCGCCGACCCCGAGCTGCGGTTCACCCAAGGTGGGCAGGCCGTCGCCA 61018 |||| | ||| || | ||||| |||||||| ||||||| || ||| || |||| Sbjct 1125038 TCGGGAACCTCACGGGAGACCCGGAGCTGCGTTTCACCCCCTCGGGTGCGGCGGTGGCCA 1125097 Query 61019 ACTTCACCGTCGTGTCCAACGAACGCCGCCG-----CGACGCCCAGGGCAAC---TGGGT 61070 ||||||| || | ||||| |||||| | |||| |||| ||| ||| Sbjct 1125098 ACTTCACGGTGGCGTCCA-----CGCCGCGGACCTTCGACCGCCAGTCGAACGAGTGGAA 1125152 Query 61071 CGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTAGC 61130 ||||| ||| || ||| | |||||| | ||||||||||| ||||| |||||||| || Sbjct 1125153 GGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGAGAACGTCGC 1125212 Query 61131 GGAAAGCCTCCAGAAAGGCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCCTT 61190 ||| || ||| ||| ||||||||||||||| ||| |||| |||||||| | Sbjct 1125213 GGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGGGCCGCCTCGTCCAGCGCTCGTA 1125272 Query 61191 CGAGACCAAGGAAGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGCCC 61250 ||||||| || || || |||||||||||| ||||| || |||| ||||||||||| || Sbjct 1125273 CGAGACCCGCGAGGGGGAGAAGCGCACCGTCGTCGAGCTGCAGGTGGACGAGATCGGTCC 1125332 Query 61251 GTCGCTGCG 61259 || ||||| Sbjct 1125333 CTCCCTGCG 1125341 Score = 122 bits (134), Expect = 4e-23 Identities = 148/198 (75%), Gaps = 8/198 (4%) Strand=Plus/Plus Query 50935 CCACCCCAGGACCTAGCCGCCGAG-TCAGCAGTCCTCGGCGCCATGCTTCTCTCCAAGAA 50993 || ||||||||| | ||||||||| | ||| || ||||||| |||||| || || ||| | Sbjct 1128287 CCGCCCCAGGACGTCGCCGCCGAGATGAGC-GTGCTCGGCGGCATGCTGCTGTCGAAGGA 1128345 Query 50994 CGCCACCCCGGCCGTCATGGAG---ATTCTCAAGCCCGAGGACTTCTACCGCCCCAACCA 51050 ||||| | ||| |||||| ||| || | | |||| |||||||||||| || Sbjct 1128346 CGCCATCGCGGACGTCATCGAGCAGATCCGCGGCTCCGA---CTTCTACCGCCCGGCGCA 1128402 Query 51051 CGCCACCGTCTACCAGATCATCACCGACCTCTACATGGCCGGTGAGTCCGCCGACGTCAT 51110 || | ||||||| || |||| |||||||||| ||| ||| ||||||||| || Sbjct 1128403 CGAGATCGTCTACGAGTCGATCATCGACCTCTACGGTCGCGGCGAGCCCGCCGACGCGAT 1128462 Query 51111 CACCGTCGCCGCGGAGCT 51128 |||||||| ||||||||| Sbjct 1128463 CACCGTCGTCGCGGAGCT 1128480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247420974102336