Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_022067.1
Length=109960
Score E
Sequences producing significant alignments: (Bits) Value
seq17 143 2e-29
seq9489 123 2e-23
>seq17
Length=237104
Score = 143 bits (158), Expect = 2e-29
Identities = 211/298 (71%), Gaps = 3/298 (1%)
Strand=Plus/Minus
Query 95557 CGCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCACCCTC 95616
||| |||| ||||||||| | |||| ||| || ||||||| ||| || || ||
Sbjct 111820 CGCGCCCATGGGCAGGAACAGGGCGTCGCCCTGGCCGATGAGCTTCTCCGCGCCGGGCTG 111761
Query 95617 GTCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCAC 95676
||| || | || || || | ||| || | || ||||||| ||||| ||||||||
Sbjct 111760 GTCGAGCACGACGCGCGAGTCCGCGAGGGACGACGTCGCGAACGCGAGCCGCGACGGCAC 111701
Query 95677 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 95736
||| | ||||| ||||| || || || || || || || ||||||||||| || || ||
Sbjct 111700 GTTCGCCTTGATGAGGCCCGTCACGACGTCGACCGACGGGCGCTGCGTCGCGAGCACCAG 111641
Query 95737 ATGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTT 95796
|| ||||| || |||||||| ||| | |||||| || ||||||||| ||
Sbjct 111640 GTGGATGCCCGCCGCGCGCGCGAGCTGCGTGATGCGCTGGATCGAGGCCTCGACGTCGCG 111581
Query 95797 CTTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGATGTAGGGG 95854
| | || ||||||||||||| || ||||||||||| || |||| | ||| |||
Sbjct 111580 C---GGGGCGACCATCATGAGGTCGGCGAGCTCGTCGACGACGACCAGCAGGTACGGG 111526
>seq9489
Length=379987
Score = 123 bits (136), Expect = 2e-23
Identities = 230/334 (69%), Gaps = 4/334 (1%)
Strand=Plus/Minus
Query 98041 AGGTAGTACGGGCGATCCAGCAGGATCGGGTCAACCTCGCCGGCCGGCACGAACTCCACA 98100
|||||||| ||| || ||||||| |||||| | || || |||||||||||||||
Sbjct 200933 AGGTAGTAGCTGCGGTCGAGCAGGAGCGGGTCGATCTGCTCGCTCGGCACGAACTCCACG 200874
Query 98101 ACGTCAATCACCTTGTTGGTTTCGCTGGGCAGCTCTGCCAAGTCCTCATTGGTCAGTAGG 98160
|| || ||| | | || ||| ||| ||| | || |||||||| | ||||| | |
Sbjct 200873 ACCTCGATCTCACGGCTGCGCTCGGCGGGGAGCGCGGCGAAGTCCTCGCTCGTCAGCACG 200814
Query 98161 GCGGTTTGCCCGTCGACCTCGAACACCTTGCCCAGATCGGC-CGTGTGG-ACCTGCTCCC 98218
|||| || || || | ||| || ||||| | ||| || ||| || || ||| |
Sbjct 200813 ACGGTGCGCTCGCCGTCGTCGTACGCCTTGTC--GATGTGCTCGTACGGCACGACCTCGC 200756
Query 98219 CACACGTCTCACAGACCTTGTGGTAGCGAATCCGCCCGCCGTCCTGGACGTGCGCCAGAT 98278
| |||| || || ||||||| || || |||||||||| | |||| || | |
Sbjct 200755 CGTCGATCTCGCACACGCGCCGGTAGCGGATGCGGCCGCCGTCCTTGTCGTGGACCTGGT 200696
Query 98279 GGCCCTTCAGGTCGTGTTCCTCGGTGGCCGCGTACATCTTCACCGGCACGTTGACCAACC 98338
| | || |||||| ||||| || || | ||||| ||| |||||||||||||| | |
Sbjct 200695 GCAGCGGCACGTCGTGGTCCTCCGTCGCGGAGTACACCTTGACCGGCACGTTGACGAGGC 200636
Query 98339 CGAAGTTGACCGCGCCTGTCCAAACCGCTCTCAT 98372
|||| ||| ||||| |||| | || |||||
Sbjct 200635 CGAACGTGATGGCGCCCTTCCAGATGGCCCTCAT 200602
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 351706508564852
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |