Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_022067.1 Length=109960 Score E Sequences producing significant alignments: (Bits) Value seq17 143 2e-29 seq9489 123 2e-23 >seq17 Length=237104 Score = 143 bits (158), Expect = 2e-29 Identities = 211/298 (71%), Gaps = 3/298 (1%) Strand=Plus/Minus Query 95557 CGCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCACCCTC 95616 ||| |||| ||||||||| | |||| ||| || ||||||| ||| || || || Sbjct 111820 CGCGCCCATGGGCAGGAACAGGGCGTCGCCCTGGCCGATGAGCTTCTCCGCGCCGGGCTG 111761 Query 95617 GTCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCAC 95676 ||| || | || || || | ||| || | || ||||||| ||||| |||||||| Sbjct 111760 GTCGAGCACGACGCGCGAGTCCGCGAGGGACGACGTCGCGAACGCGAGCCGCGACGGCAC 111701 Query 95677 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 95736 ||| | ||||| ||||| || || || || || || || ||||||||||| || || || Sbjct 111700 GTTCGCCTTGATGAGGCCCGTCACGACGTCGACCGACGGGCGCTGCGTCGCGAGCACCAG 111641 Query 95737 ATGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTT 95796 || ||||| || |||||||| ||| | |||||| || ||||||||| || Sbjct 111640 GTGGATGCCCGCCGCGCGCGCGAGCTGCGTGATGCGCTGGATCGAGGCCTCGACGTCGCG 111581 Query 95797 CTTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGATGTAGGGG 95854 | | || ||||||||||||| || ||||||||||| || |||| | ||| ||| Sbjct 111580 C---GGGGCGACCATCATGAGGTCGGCGAGCTCGTCGACGACGACCAGCAGGTACGGG 111526 >seq9489 Length=379987 Score = 123 bits (136), Expect = 2e-23 Identities = 230/334 (69%), Gaps = 4/334 (1%) Strand=Plus/Minus Query 98041 AGGTAGTACGGGCGATCCAGCAGGATCGGGTCAACCTCGCCGGCCGGCACGAACTCCACA 98100 |||||||| ||| || ||||||| |||||| | || || ||||||||||||||| Sbjct 200933 AGGTAGTAGCTGCGGTCGAGCAGGAGCGGGTCGATCTGCTCGCTCGGCACGAACTCCACG 200874 Query 98101 ACGTCAATCACCTTGTTGGTTTCGCTGGGCAGCTCTGCCAAGTCCTCATTGGTCAGTAGG 98160 || || ||| | | || ||| ||| ||| | || |||||||| | ||||| | | Sbjct 200873 ACCTCGATCTCACGGCTGCGCTCGGCGGGGAGCGCGGCGAAGTCCTCGCTCGTCAGCACG 200814 Query 98161 GCGGTTTGCCCGTCGACCTCGAACACCTTGCCCAGATCGGC-CGTGTGG-ACCTGCTCCC 98218 |||| || || || | ||| || ||||| | ||| || ||| || || ||| | Sbjct 200813 ACGGTGCGCTCGCCGTCGTCGTACGCCTTGTC--GATGTGCTCGTACGGCACGACCTCGC 200756 Query 98219 CACACGTCTCACAGACCTTGTGGTAGCGAATCCGCCCGCCGTCCTGGACGTGCGCCAGAT 98278 | |||| || || ||||||| || || |||||||||| | |||| || | | Sbjct 200755 CGTCGATCTCGCACACGCGCCGGTAGCGGATGCGGCCGCCGTCCTTGTCGTGGACCTGGT 200696 Query 98279 GGCCCTTCAGGTCGTGTTCCTCGGTGGCCGCGTACATCTTCACCGGCACGTTGACCAACC 98338 | | || |||||| ||||| || || | ||||| ||| |||||||||||||| | | Sbjct 200695 GCAGCGGCACGTCGTGGTCCTCCGTCGCGGAGTACACCTTGACCGGCACGTTGACGAGGC 200636 Query 98339 CGAAGTTGACCGCGCCTGTCCAAACCGCTCTCAT 98372 |||| ||| ||||| |||| | || ||||| Sbjct 200635 CGAACGTGATGGCGCCCTTCCAGATGGCCCTCAT 200602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351706508564852