Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq9491 219 7e-51 seq9384 111 2e-18 seq13 111 2e-18 >seq9491 Length=867449 Score = 219 bits (242), Expect = 7e-51 Identities = 526/775 (68%), Gaps = 32/775 (4%) Strand=Plus/Minus Query 2174782 CGGCGACGTGGCGCACGACGTCGGGCTGGCGACGGTGGTCCTTGGCCGAGTTGTCGTGCG 2174841 ||| ||| | ||||||||| || | |||||| |||| |||| | |||||| |||||| Sbjct 782993 CGGAGACCTCGCGCACGACCTCCGCCTGGCGCACGTGGCTCTTGCCGGAGTTGCCGTGCG 782934 Query 2174842 AACAGTCGATGACGATGGCCG-GCGGGGGGTCCATCCGTCGCG---CGACG-----GCGG 2174892 | ||||| ||||| | ||| || | | || ||| |||| ||| | ||| Sbjct 782933 ACGCGTCGACGACGA-GCCCGTGCTCCGTGACC--CCGCCGCGGCCCGAGGTGCGCGCGA 782877 Query 2174893 CATCGATGACGGCGGCCACTGATGCGGCATCGAAATTGGGCCGACCGGGCGA--GCCCCG 2174950 | ||| | || || || |||| || | ||||| | ||| ||| ||| || Sbjct 782876 CCGCGAGCGCCGCCGCGACGTCGTCGGCCCCGTAGTTGGGGC--CCGAGCGCCCGCCGCG 782819 Query 2174951 CAGCACAATGTGACCGTCGGGGTTGCCAGTGCTGCGGCA-GGCGGCAGCGCGACCGTCGC 2175009 ||| | | ||| | |||||||||||| | | | | || |||||| || || ||| Sbjct 782818 CAGGATGACGTGGCAGTCGGGGTTGCCCGCGGT-CTCCACGGCGGCGGCCCGGCCGAGCG 782760 Query 2175010 CGTCGATCCAGAGAAAGGTGTG-TGGCTGCGCGGCGGTGC-GCACGGCATCGAGCGCCGT 2175067 ||| || | || || ||||| | ||| ||| |||||| ||| | | |||| ||| | Sbjct 782759 AGTCCATGCCGAAGAACGTGTGCTCGCT-CGCCGCGGTGATGCA-GCCGTCGACCGCGAT 782702 Query 2175068 TGCCACGCTGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCAT 2175127 |||| ||||||||| |||| || |||||||| |||| | ||| |||| || | Sbjct 782701 CTGCACGTCGCCGTCGGTCGCGTTCTTGAACCCGACGGGCATGGACAGGCCCGAGGCGAG 782642 Query 2175128 TTCGCGGTGCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCCCCACGCCACGAGGTC 2175187 | |||||||||||| ||||| | |||||||||| | |||||||||| |||| ||| Sbjct 782641 CTGGCGGTGCACCTGCGACTCGGCGTTGCGCGCGCCGATCGCGCCCCACGACACGGCGTC 782582 Query 2175188 TGCCAAATAGGGCGCCACCAAAGGGCTGAGAAACTCGACAGCCACGGGCTGGCCGACGTC 2175247 || | || ||| | || ||| |||||| || | || |||| |||| Sbjct 782581 GGCGATGTACTGCGGGCTCGTCGGCTCGAGGAACTCGCACGCGGCCGGGACGCCGGCGTC 782522 Query 2175248 GACGACCAGGTCGCGCAGCAG-TCGACGCGATGTGGCG-AGGCCGGCGGCCAGGCGGCAC 2175305 || ||| | || |||||| ||| |||| | |||| |||||| | || | | | Sbjct 782521 GAGGAC---GCCGAGCAGCACCTCG-CGCGC-GAGGCGCAGGCCGTGGTGCACGTCGTGC 782467 Query 2175306 GACCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTT 2175365 ||||||||||||| |||||| || ||||||||||| || ||||||||||||||||| Sbjct 782466 GACCCGTCGAGGTGCGGGTCGTTGATGAGGCCCTTCCAGCCCACGGTCGTGCGCGGCTTC 782407 Query 2175366 TCGACATAGGCGCGCATGACCACCAGGAGAGCGTCGCCGACCTCTGTCTCGGCAAAGGTG 2175425 |||| ||| |||||||||| |||| ||| |||| ||| ||| | || | || | Sbjct 782406 TCGAAGTAGACGCGCATGACGACCATGAGGTCGTCCGCGAGCTC---GTGCGCGACGGCG 782350 Query 2175426 CGCAGCCGTCGGCCATACTCGACGATGGCCTGGGGATCGTGCGCCGAACACGGACCGACG 2175485 ||| || | | ||||||| ||||| ||| |||||| |||| || || |||||| Sbjct 782349 GCCAGGCGCCCCGCGTACTCGAGCGCGGCCTCGGGGTCGTGCACCGAGCAGGGGCCGACG 782290 Query 2175486 ACCACCAAGAGACGCCGATCCGATCCGTCGAGCACGTGTCTCACCTGGCGGCGCG 2175540 | || | ||| || | || || |||| |||| | |||| |||||||| Sbjct 782289 ATGACGAGGAGGCGGTGGTCGTCGCCCGCGAGAACGTCACGGACCTCGCGGCGCG 782235 >seq9384 Length=412 Score = 111 bits (122), Expect = 2e-18 Identities = 134/182 (74%), Gaps = 3/182 (2%) Strand=Plus/Plus Query 2175305 CGACCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTT 2175364 |||||||||||||| |||||| || ||||||||||| || ||||||||||||||||| Sbjct 215 CGACCCGTCGAGGTGCGGGTCGATGATGAGGCCCTTCCAGCCCACGGTCGTGCGCGGCTT 274 Query 2175365 TTCGACATAGGCGCGCATGACCACCAGGAGAGCGTCGCCGACCTCTGTCTCGGCAAAGGT 2175424 |||| ||| |||||||||| |||| ||| |||| ||| ||| | || | || Sbjct 275 CTCGAAGTAGACGCGCATGACGACCATGAGGTCGTCCGCGAGCTC---GTGCGCGACGGC 331 Query 2175425 GCGCAGCCGTCGGCCATACTCGACGATGGCCTGGGGATCGTGCGCCGAACACGGACCGAC 2175484 | ||| || | | ||||||| |||| ||| |||||| ||| || || ||||| Sbjct 332 GTCCAGGCGCCCCGCGTACTCGAGCGCGGCCGCGGGGTCGTGCACCGCGCAGGGGCCGAC 391 Query 2175485 GA 2175486 || Sbjct 392 GA 393 >seq13 Length=283376 Score = 111 bits (122), Expect = 2e-18 Identities = 230/336 (68%), Gaps = 10/336 (3%) Strand=Plus/Minus Query 118570 CGTCGCGAATGTCGCCCAGGAGGACGCGCGTGACCGTGTTTGACCCGTTCTTGCGCACGC 118629 ||||||| || | |||| | | | |||||| ||| | ||| ||||||||||| Sbjct 15357 CGTCGCGCATCTGGCCCCGCACCGCCGACGTGACGGTGCGCGCGCCGGGCTTGCGCACGC 15298 Query 118630 CGCGCATGCACACGCACATGTGGAGGCCCTCGAGCACGACGCCGACGCCGCGCGCGCCCG 118689 ||||||| ||| ||||| ||| || ||||| |||||| ||||||||| || | Sbjct 15297 CGCGCATCGACATGCACAGGTGCTCGCACTCGACGACGACGATCGCGCCGCGCG-GCTTG 15239 Query 118690 -TGACCTCGCTGATGCTC-TCGGCGATCTGGCGCGTGAGCGCCTCCTGCACCTGGAAGCG 118747 | ||| || || | || |||| ||| ||||||| |||||||||||| ||| Sbjct 15238 AGGTGCTCCACGA-GCGCGTCCGCGACCTGCGACGTGAGCCGCTCCTGCACCTGCGGGCG 15180 Query 118748 GTCCGAGAGCATGTCGACGATGCGCGGGATCTTGCTCAGGCCGATGATCCTGCC-----C 118802 | || | || ||||||| ||||| || ||| |||||| |||| | ||| | Sbjct 15179 GCGCGCGTACACCTCGACGAGGCGCGCGAGCTTCGACAGGCCCGTGATGCGGCCGTCCAC 15120 Query 118803 G-CGGGCAGGTAGCCCACGTGCGCCTTGCCGATAAAGGGCAGCAGATGGTGCTCGCACAT 118861 | ||| | ||| || |||||||| |||| ||||||| || |||||||||||| | Sbjct 15119 GTTGGGGATGTACCCGACGTGCGCGACGCCGTGGAAGGGCACGAGGTGGTGCTCGCACGT 15060 Query 118862 GGAGAAAAAGTCAATGTCGCGCACGGTCACCATCTC 118897 ||| | | || ||||| ||| ||||||||| Sbjct 15059 CGAGTACACCTCGATGTCCTTGACGAGCACCATCTC 15024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915236692666988