Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_022976.1
Length=75894
Score E
Sequences producing significant alignments: (Bits) Value
seq17 434 5e-117
seq1 165 4e-36
>seq17
Length=237104
Score = 434 bits (480), Expect = 5e-117
Identities = 577/801 (72%), Gaps = 3/801 (0%)
Strand=Plus/Plus
Query 66079 GTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTAC 66138
|| || ||||| ||||| ||||| ||||| |||||| ||| || |||||||| ||
Sbjct 124031 GTCGAGGTCATCCCCACGGGCTCCATCGCGCTGGACATCGCGCTCGGCATCGGCGGCCTG 124090
Query 66139 CCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGT 66198
||| | || || || | || | |||||||| || || || || ||| | || ||
Sbjct 124091 CCGCGCGGGCGCGTCATCGAGGTGTACGGCCCGGAGTCCTCCGGAAAGACGACCGTGGCG 124150
Query 66199 CTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAG 66258
|||||||| ||||||| || ||| ||||| |||| ||| || | ||||||||| |||
Sbjct 124151 CTCCACGCCGTGGCCAGCGCCCAGCGCGCCGGCGGCATCGCGGCGTTCATCGACGCCGAG 124210
Query 66259 CACTCCCTGGACCCCGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTG 66318
||| | || ||||| |||||||||||| |||||| || ||| |||| ||| | ||
Sbjct 124211 CACGCACTCGACCCGGAGTACGCCAAGAAGCTCGGCGTCGACACCGACGCCCTGCTCGTC 124270
Query 66319 GTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGC 66378
||||||||||| || |||||||| || |||||| ||| | || || || |||
Sbjct 124271 TCCCAGCCGGACACGGGGGAGCAGGCGCTCGAGATCACGGACATGCTGATCCGCTCGGGC 124330
Query 66379 GAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAA 66438
| ||| |||| ||||| | ||||| || |||||||| ||||| || ||| ||||
Sbjct 124331 GCGCTCGACATCATCGTCATCGACTCCGTCGCGGCCCTCGTGCCCAAGGCGGAGATCGAG 124390
Query 66439 GGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGC 66498
||||| || || ||||| |||||||| || || || ||||||||||||||||| |||||
Sbjct 124391 GGCGAGATGGGCGACAGCCACGTCGGTCTCCAGGCCCGCCTCATGTCGCAGGCGCTGCGC 124450
Query 66499 AAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGC 66558
||| ||||||| | || | || |||| | ||| |||||||| | |||
Sbjct 124451 AAGATCACCGGTGCGCTCAGCGCGTCCGGCACGACCGCCATCTTCATCAACCAGCTCCGC 124510
Query 66559 GAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTG 66618
||||||||||| |||| || |||| | ||||| || || || || ||||| ||
Sbjct 124511 GAGAAGATCGG---CGTGTTCTTCGGCTCTCCCGAGACGACGACCGGTGGCAAGGCGCTG 124567
Query 66619 AGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGAT 66678
| |||||||||||| ||||| | || |||| ||||||| ||| ||||| |||
Sbjct 124568 AAGTTCTACGCCTCGGTCCGTCTCGACATCCGCCGCATCGAGACCCTCAAGGAGGGCACC 124627
Query 66679 GAGGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCAC 66738
|| || ||||||||||| ||||| ||||| ||||||||||||||| |||| |||||| |
Sbjct 124628 GACGCGGTCGGCAACCGGACCCGCGTGAAGGTCGTCAAGAACAAGATGGCGCCGCCGTTC 124687
Query 66739 CGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTC 66798
| ||||||||| | || | ||||||| |||||||| || |||| | ||| ||
Sbjct 124688 AAGCAGGCCGAGTTCGACATCCTCTACGGGGTCGGCATCTCCCGCGAGGGTGGCCTCATC 124747
Query 66799 GACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGAC 66858
||| ||| |||| ||| || | ||| ||||| || | ||||||| ||||| | |
Sbjct 124748 GACATGGGCGTGGAGCACGGGTTCGTGCGCAAGTCCGGGTCGTGGTTCACCTACGGCGGC 124807
Query 66859 AAGAACGTCGCCCAGGGCAAG 66879
| | ||| |||||||||
Sbjct 124808 GACCAGCTCGGGCAGGGCAAG 124828
>seq1
Length=1297082
Score = 165 bits (182), Expect = 4e-36
Identities = 212/292 (73%), Gaps = 13/292 (4%)
Strand=Plus/Plus
Query 60355 GACCCCGAGCTGCGGTTCACCCAAGGTGGGCAGGCCGTCGCCAACTTCACCGTCGTGTCC 60414
||||| |||||||| ||||||| || ||| || ||||||||||| || | ||||
Sbjct 1125055 GACCCGGAGCTGCGTTTCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCC 1125114
Query 60415 AACGAACGCCGCCG-----CGACGCCCAGGGCAAC---TGGGTCGACGGCGACGCCACAT 60466
| |||||| | |||| |||| ||| ||| ||||| ||| || |
Sbjct 1125115 A-----CGCCGCGGACCTTCGACCGCCAGTCGAACGAGTGGAAGGACGGGGACACCCTGT 1125169
Query 60467 TCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTGGCGGAAAGCCTCCAGAAAG 60526
|| | |||||| | ||||||||||| ||||| |||||||| ||||| || ||| |
Sbjct 1125170 TCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGAGAACGTCGCGGAGTCGCTGACGAAGG 1125229
Query 60527 GCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCCTTCGAGACCAAGGAAGGCG 60586
|| ||||||||||||||| ||| |||| |||||||| | ||||||| || || |
Sbjct 1125230 GCATGCGCGTCATCGTGCAGGGCCGCCTCGTCCAGCGCTCGTACGAGACCCGCGAGGGGG 1125289
Query 60587 ACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGCCCGTCGCTGCG 60638
| |||||||||||| ||||| || |||| ||||||||||| || || |||||
Sbjct 1125290 AGAAGCGCACCGTCGTCGAGCTGCAGGTGGACGAGATCGGTCCCTCCCTGCG 1125341
Score = 122 bits (134), Expect = 4e-23
Identities = 148/198 (75%), Gaps = 8/198 (4%)
Strand=Plus/Plus
Query 50520 CCACCCCAGGACCTAGCCGCCGAG-TCAGCAGTCCTCGGCGCCATGCTTCTCTCCAAGAA 50578
|| ||||||||| | ||||||||| | ||| || ||||||| |||||| || || ||| |
Sbjct 1128287 CCGCCCCAGGACGTCGCCGCCGAGATGAGC-GTGCTCGGCGGCATGCTGCTGTCGAAGGA 1128345
Query 50579 CGCCACCCCGGCCGTCATGGAG---ATTCTCAAGCCCGAGGACTTCTACCGCCCCAACCA 50635
||||| | ||| |||||| ||| || | | |||| |||||||||||| ||
Sbjct 1128346 CGCCATCGCGGACGTCATCGAGCAGATCCGCGGCTCCGA---CTTCTACCGCCCGGCGCA 1128402
Query 50636 CGCCACCGTCTACCAGATCATCACCGACCTCTACATGGCCGGTGAGTCCGCCGACGTCAT 50695
|| | ||||||| || |||| |||||||||| ||| ||| ||||||||| ||
Sbjct 1128403 CGAGATCGTCTACGAGTCGATCATCGACCTCTACGGTCGCGGCGAGCCCGCCGACGCGAT 1128462
Query 50696 CACCGTCGCCGCGGAGCT 50713
|||||||| |||||||||
Sbjct 1128463 CACCGTCGTCGCGGAGCT 1128480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 242707919389260
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |