Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_022981.1 Length=76323 Score E Sequences producing significant alignments: (Bits) Value seq17 443 1e-119 seq1 178 6e-40 >seq17 Length=237104 Score = 443 bits (490), Expect = 1e-119 Identities = 579/801 (72%), Gaps = 3/801 (0%) Strand=Plus/Plus Query 66335 GTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTAC 66394 || || ||||| ||||| ||||| ||||| |||||| ||| || |||||||| || Sbjct 124031 GTCGAGGTCATCCCCACGGGCTCCATCGCGCTGGACATCGCGCTCGGCATCGGCGGCCTG 124090 Query 66395 CCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGT 66454 ||| | || || || | || | |||||||| || || || || ||| | || || Sbjct 124091 CCGCGCGGGCGCGTCATCGAGGTGTACGGCCCGGAGTCCTCCGGAAAGACGACCGTGGCG 124150 Query 66455 CTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAG 66514 |||||||| ||||||| || ||| ||||| |||| ||| || | ||||||||| ||| Sbjct 124151 CTCCACGCCGTGGCCAGCGCCCAGCGCGCCGGCGGCATCGCGGCGTTCATCGACGCCGAG 124210 Query 66515 CACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTG 66574 ||| | || ||||| |||||||||||| |||||| || ||| |||| ||| | || Sbjct 124211 CACGCACTCGACCCGGAGTACGCCAAGAAGCTCGGCGTCGACACCGACGCCCTGCTCGTC 124270 Query 66575 GTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGC 66634 ||||||||||| || |||||||| || |||||| ||| | || || || ||| Sbjct 124271 TCCCAGCCGGACACGGGGGAGCAGGCGCTCGAGATCACGGACATGCTGATCCGCTCGGGC 124330 Query 66635 GAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAA 66694 | ||| |||| ||||| | ||||| || |||||||| ||||| || ||| |||| Sbjct 124331 GCGCTCGACATCATCGTCATCGACTCCGTCGCGGCCCTCGTGCCCAAGGCGGAGATCGAG 124390 Query 66695 GGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGC 66754 ||||| || || ||||| |||||||| || || || ||||||||||||||||| ||||| Sbjct 124391 GGCGAGATGGGCGACAGCCACGTCGGTCTCCAGGCCCGCCTCATGTCGCAGGCGCTGCGC 124450 Query 66755 AAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGC 66814 ||| ||||||| | || | || |||| | ||| |||||||| | ||| Sbjct 124451 AAGATCACCGGTGCGCTCAGCGCGTCCGGCACGACCGCCATCTTCATCAACCAGCTCCGC 124510 Query 66815 GAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGCAAGGCTTTG 66874 ||||||||||| |||| || |||| | ||||| || || || |||||||| || Sbjct 124511 GAGAAGATCGG---CGTGTTCTTCGGCTCTCCCGAGACGACGACCGGTGGCAAGGCGCTG 124567 Query 66875 AGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGAT 66934 | |||||||||||| ||||| | || |||| ||||||| ||| ||||| ||| Sbjct 124568 AAGTTCTACGCCTCGGTCCGTCTCGACATCCGCCGCATCGAGACCCTCAAGGAGGGCACC 124627 Query 66935 GAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCAC 66994 || || ||||||||||| ||||| ||||||||||||||||||||| |||| |||||| | Sbjct 124628 GACGCGGTCGGCAACCGGACCCGCGTGAAGGTCGTCAAGAACAAGATGGCGCCGCCGTTC 124687 Query 66995 CGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTC 67054 | ||||||||| | || | ||||||| |||||||| || |||| | ||| || Sbjct 124688 AAGCAGGCCGAGTTCGACATCCTCTACGGGGTCGGCATCTCCCGCGAGGGTGGCCTCATC 124747 Query 67055 GACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGAC 67114 ||| ||| |||| ||| || | ||| ||||| || | ||||||| ||||| | | Sbjct 124748 GACATGGGCGTGGAGCACGGGTTCGTGCGCAAGTCCGGGTCGTGGTTCACCTACGGCGGC 124807 Query 67115 AAGAACGTCGCCCAGGGCAAG 67135 | | ||| ||||||||| Sbjct 124808 GACCAGCTCGGGCAGGGCAAG 124828 >seq1 Length=1297082 Score = 178 bits (196), Expect = 6e-40 Identities = 225/309 (73%), Gaps = 13/309 (4%) Strand=Plus/Plus Query 60594 TCGGCACCCTTACCGCCGACCCCGAGCTGCGGTTCACTTCCGGTGGGCAGGCCGTCGCCA 60653 |||| | ||| || | ||||| |||||||| ||||| || || ||| || |||| Sbjct 1125038 TCGGGAACCTCACGGGAGACCCGGAGCTGCGTTTCACCCCCTCGGGTGCGGCGGTGGCCA 1125097 Query 60654 ACTTCACCGTCGTGTCCAACGAACGCCGCCG-----CGACGCCCAGGGCAAC---TGGGT 60705 ||||||| || | ||||| |||||| | |||| |||| ||| ||| Sbjct 1125098 ACTTCACGGTGGCGTCCA-----CGCCGCGGACCTTCGACCGCCAGTCGAACGAGTGGAA 1125152 Query 60706 CGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTAGC 60765 ||||| ||| || ||| | |||||| | ||||||||||| ||||| |||||||| || Sbjct 1125153 GGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGAGAACGTCGC 1125212 Query 60766 GGAAAGCCTCCAGAAGGGCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCCTT 60825 ||| || ||||||| ||||||||||||||| ||| |||| |||||||| | Sbjct 1125213 GGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGGGCCGCCTCGTCCAGCGCTCGTA 1125272 Query 60826 CGAGACCAGGGAAGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGCCC 60885 ||||||| | || || || |||||||||||| ||||| || |||| ||||||||||| || Sbjct 1125273 CGAGACCCGCGAGGGGGAGAAGCGCACCGTCGTCGAGCTGCAGGTGGACGAGATCGGTCC 1125332 Query 60886 GTCGCTGCG 60894 || ||||| Sbjct 1125333 CTCCCTGCG 1125341 Score = 118 bits (130), Expect = 5e-22 Identities = 145/197 (74%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 50959 CCACCCCAGGACCTAGCCGCCGAGTCGGCAGTCCTCGGCGCCATGCTTCTCTCCAAGAAC 51018 || ||||||||| | ||||||||| | || ||||||| |||||| || || ||| || Sbjct 1128287 CCGCCCCAGGACGTCGCCGCCGAGATGAGCGTGCTCGGCGGCATGCTGCTGTCGAAGGAC 1128346 Query 51019 GCCACCCCGGCCGTCATGGAG---ATTCTCAAGCCCGAGGACTTCTACCGCCCCAACCAC 51075 |||| | ||| |||||| ||| || | | |||| |||||||||||| ||| Sbjct 1128347 GCCATCGCGGACGTCATCGAGCAGATCCGCGGCTCCGA---CTTCTACCGCCCGGCGCAC 1128403 Query 51076 GCCACCGTCTACCAGATCATCACCGACCTCTACATGGCCGGTGAGTCCGCCGACGTCATC 51135 | | ||||||| || |||| |||||||||| ||| ||| ||||||||| ||| Sbjct 1128404 GAGATCGTCTACGAGTCGATCATCGACCTCTACGGTCGCGGCGAGCCCGCCGACGCGATC 1128463 Query 51136 ACCGTCGCCGCGGAGCT 51152 ||||||| ||||||||| Sbjct 1128464 ACCGTCGTCGCGGAGCT 1128480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244080560578608