Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_022981.1
Length=76323
Score E
Sequences producing significant alignments: (Bits) Value
seq17 443 1e-119
seq1 178 6e-40
>seq17
Length=237104
Score = 443 bits (490), Expect = 1e-119
Identities = 579/801 (72%), Gaps = 3/801 (0%)
Strand=Plus/Plus
Query 66335 GTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTAC 66394
|| || ||||| ||||| ||||| ||||| |||||| ||| || |||||||| ||
Sbjct 124031 GTCGAGGTCATCCCCACGGGCTCCATCGCGCTGGACATCGCGCTCGGCATCGGCGGCCTG 124090
Query 66395 CCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGT 66454
||| | || || || | || | |||||||| || || || || ||| | || ||
Sbjct 124091 CCGCGCGGGCGCGTCATCGAGGTGTACGGCCCGGAGTCCTCCGGAAAGACGACCGTGGCG 124150
Query 66455 CTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAG 66514
|||||||| ||||||| || ||| ||||| |||| ||| || | ||||||||| |||
Sbjct 124151 CTCCACGCCGTGGCCAGCGCCCAGCGCGCCGGCGGCATCGCGGCGTTCATCGACGCCGAG 124210
Query 66515 CACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTG 66574
||| | || ||||| |||||||||||| |||||| || ||| |||| ||| | ||
Sbjct 124211 CACGCACTCGACCCGGAGTACGCCAAGAAGCTCGGCGTCGACACCGACGCCCTGCTCGTC 124270
Query 66575 GTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGC 66634
||||||||||| || |||||||| || |||||| ||| | || || || |||
Sbjct 124271 TCCCAGCCGGACACGGGGGAGCAGGCGCTCGAGATCACGGACATGCTGATCCGCTCGGGC 124330
Query 66635 GAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAA 66694
| ||| |||| ||||| | ||||| || |||||||| ||||| || ||| ||||
Sbjct 124331 GCGCTCGACATCATCGTCATCGACTCCGTCGCGGCCCTCGTGCCCAAGGCGGAGATCGAG 124390
Query 66695 GGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGC 66754
||||| || || ||||| |||||||| || || || ||||||||||||||||| |||||
Sbjct 124391 GGCGAGATGGGCGACAGCCACGTCGGTCTCCAGGCCCGCCTCATGTCGCAGGCGCTGCGC 124450
Query 66755 AAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGC 66814
||| ||||||| | || | || |||| | ||| |||||||| | |||
Sbjct 124451 AAGATCACCGGTGCGCTCAGCGCGTCCGGCACGACCGCCATCTTCATCAACCAGCTCCGC 124510
Query 66815 GAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGCAAGGCTTTG 66874
||||||||||| |||| || |||| | ||||| || || || |||||||| ||
Sbjct 124511 GAGAAGATCGG---CGTGTTCTTCGGCTCTCCCGAGACGACGACCGGTGGCAAGGCGCTG 124567
Query 66875 AGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGAT 66934
| |||||||||||| ||||| | || |||| ||||||| ||| ||||| |||
Sbjct 124568 AAGTTCTACGCCTCGGTCCGTCTCGACATCCGCCGCATCGAGACCCTCAAGGAGGGCACC 124627
Query 66935 GAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCAC 66994
|| || ||||||||||| ||||| ||||||||||||||||||||| |||| |||||| |
Sbjct 124628 GACGCGGTCGGCAACCGGACCCGCGTGAAGGTCGTCAAGAACAAGATGGCGCCGCCGTTC 124687
Query 66995 CGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTC 67054
| ||||||||| | || | ||||||| |||||||| || |||| | ||| ||
Sbjct 124688 AAGCAGGCCGAGTTCGACATCCTCTACGGGGTCGGCATCTCCCGCGAGGGTGGCCTCATC 124747
Query 67055 GACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGAC 67114
||| ||| |||| ||| || | ||| ||||| || | ||||||| ||||| | |
Sbjct 124748 GACATGGGCGTGGAGCACGGGTTCGTGCGCAAGTCCGGGTCGTGGTTCACCTACGGCGGC 124807
Query 67115 AAGAACGTCGCCCAGGGCAAG 67135
| | ||| |||||||||
Sbjct 124808 GACCAGCTCGGGCAGGGCAAG 124828
>seq1
Length=1297082
Score = 178 bits (196), Expect = 6e-40
Identities = 225/309 (73%), Gaps = 13/309 (4%)
Strand=Plus/Plus
Query 60594 TCGGCACCCTTACCGCCGACCCCGAGCTGCGGTTCACTTCCGGTGGGCAGGCCGTCGCCA 60653
|||| | ||| || | ||||| |||||||| ||||| || || ||| || ||||
Sbjct 1125038 TCGGGAACCTCACGGGAGACCCGGAGCTGCGTTTCACCCCCTCGGGTGCGGCGGTGGCCA 1125097
Query 60654 ACTTCACCGTCGTGTCCAACGAACGCCGCCG-----CGACGCCCAGGGCAAC---TGGGT 60705
||||||| || | ||||| |||||| | |||| |||| ||| |||
Sbjct 1125098 ACTTCACGGTGGCGTCCA-----CGCCGCGGACCTTCGACCGCCAGTCGAACGAGTGGAA 1125152
Query 60706 CGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTAGC 60765
||||| ||| || ||| | |||||| | ||||||||||| ||||| |||||||| ||
Sbjct 1125153 GGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGAGAACGTCGC 1125212
Query 60766 GGAAAGCCTCCAGAAGGGCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCCTT 60825
||| || ||||||| ||||||||||||||| ||| |||| |||||||| |
Sbjct 1125213 GGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGGGCCGCCTCGTCCAGCGCTCGTA 1125272
Query 60826 CGAGACCAGGGAAGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGCCC 60885
||||||| | || || || |||||||||||| ||||| || |||| ||||||||||| ||
Sbjct 1125273 CGAGACCCGCGAGGGGGAGAAGCGCACCGTCGTCGAGCTGCAGGTGGACGAGATCGGTCC 1125332
Query 60886 GTCGCTGCG 60894
|| |||||
Sbjct 1125333 CTCCCTGCG 1125341
Score = 118 bits (130), Expect = 5e-22
Identities = 145/197 (74%), Gaps = 6/197 (3%)
Strand=Plus/Plus
Query 50959 CCACCCCAGGACCTAGCCGCCGAGTCGGCAGTCCTCGGCGCCATGCTTCTCTCCAAGAAC 51018
|| ||||||||| | ||||||||| | || ||||||| |||||| || || ||| ||
Sbjct 1128287 CCGCCCCAGGACGTCGCCGCCGAGATGAGCGTGCTCGGCGGCATGCTGCTGTCGAAGGAC 1128346
Query 51019 GCCACCCCGGCCGTCATGGAG---ATTCTCAAGCCCGAGGACTTCTACCGCCCCAACCAC 51075
|||| | ||| |||||| ||| || | | |||| |||||||||||| |||
Sbjct 1128347 GCCATCGCGGACGTCATCGAGCAGATCCGCGGCTCCGA---CTTCTACCGCCCGGCGCAC 1128403
Query 51076 GCCACCGTCTACCAGATCATCACCGACCTCTACATGGCCGGTGAGTCCGCCGACGTCATC 51135
| | ||||||| || |||| |||||||||| ||| ||| ||||||||| |||
Sbjct 1128404 GAGATCGTCTACGAGTCGATCATCGACCTCTACGGTCGCGGCGAGCCCGCCGACGCGATC 1128463
Query 51136 ACCGTCGCCGCGGAGCT 51152
||||||| |||||||||
Sbjct 1128464 ACCGTCGTCGCGGAGCT 1128480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 244080560578608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |