Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_022988.1
Length=74210
Score E
Sequences producing significant alignments: (Bits) Value
seq17 443 1e-119
seq1 172 3e-38
>seq17
Length=237104
Score = 443 bits (490), Expect = 1e-119
Identities = 579/801 (72%), Gaps = 3/801 (0%)
Strand=Plus/Plus
Query 64668 GTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTAC 64727
|| || ||||| ||||| ||||| ||||| |||||| ||| || |||||||| ||
Sbjct 124031 GTCGAGGTCATCCCCACGGGCTCCATCGCGCTGGACATCGCGCTCGGCATCGGCGGCCTG 124090
Query 64728 CCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGT 64787
||| | || || || | || | |||||||| || || || || ||| | || ||
Sbjct 124091 CCGCGCGGGCGCGTCATCGAGGTGTACGGCCCGGAGTCCTCCGGAAAGACGACCGTGGCG 124150
Query 64788 CTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAG 64847
|||||||| ||||||| || ||| ||||| |||| ||| || | ||||||||| |||
Sbjct 124151 CTCCACGCCGTGGCCAGCGCCCAGCGCGCCGGCGGCATCGCGGCGTTCATCGACGCCGAG 124210
Query 64848 CACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTG 64907
||| | || ||||| |||||||||||| |||||| || ||| |||| ||| | ||
Sbjct 124211 CACGCACTCGACCCGGAGTACGCCAAGAAGCTCGGCGTCGACACCGACGCCCTGCTCGTC 124270
Query 64908 GTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGC 64967
||||||||||| || |||||||| || |||||| ||| | || || || |||
Sbjct 124271 TCCCAGCCGGACACGGGGGAGCAGGCGCTCGAGATCACGGACATGCTGATCCGCTCGGGC 124330
Query 64968 GAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAA 65027
| ||| |||| ||||| | ||||| || |||||||| ||||| || ||| ||||
Sbjct 124331 GCGCTCGACATCATCGTCATCGACTCCGTCGCGGCCCTCGTGCCCAAGGCGGAGATCGAG 124390
Query 65028 GGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGC 65087
||||| || || ||||| |||||||| || || || ||||||||||||||||| |||||
Sbjct 124391 GGCGAGATGGGCGACAGCCACGTCGGTCTCCAGGCCCGCCTCATGTCGCAGGCGCTGCGC 124450
Query 65088 AAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGC 65147
||| ||||||| | || | || |||| | ||| |||||||| | |||
Sbjct 124451 AAGATCACCGGTGCGCTCAGCGCGTCCGGCACGACCGCCATCTTCATCAACCAGCTCCGC 124510
Query 65148 GAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGCAAGGCTTTG 65207
||||||||||| |||| || |||| | ||||| || || || |||||||| ||
Sbjct 124511 GAGAAGATCGG---CGTGTTCTTCGGCTCTCCCGAGACGACGACCGGTGGCAAGGCGCTG 124567
Query 65208 AGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGAT 65267
| |||||||||||| ||||| | || |||| ||||||| ||| ||||| |||
Sbjct 124568 AAGTTCTACGCCTCGGTCCGTCTCGACATCCGCCGCATCGAGACCCTCAAGGAGGGCACC 124627
Query 65268 GAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCAC 65327
|| || ||||||||||| ||||| ||||||||||||||||||||| |||| |||||| |
Sbjct 124628 GACGCGGTCGGCAACCGGACCCGCGTGAAGGTCGTCAAGAACAAGATGGCGCCGCCGTTC 124687
Query 65328 CGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTC 65387
| ||||||||| | || | ||||||| |||||||| || |||| | ||| ||
Sbjct 124688 AAGCAGGCCGAGTTCGACATCCTCTACGGGGTCGGCATCTCCCGCGAGGGTGGCCTCATC 124747
Query 65388 GACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGAC 65447
||| ||| |||| ||| || | ||| ||||| || | ||||||| ||||| | |
Sbjct 124748 GACATGGGCGTGGAGCACGGGTTCGTGCGCAAGTCCGGGTCGTGGTTCACCTACGGCGGC 124807
Query 65448 AAGAACGTCGCCCAGGGCAAG 65468
| | ||| |||||||||
Sbjct 124808 GACCAGCTCGGGCAGGGCAAG 124828
>seq1
Length=1297082
Score = 172 bits (190), Expect = 3e-38
Identities = 224/309 (72%), Gaps = 13/309 (4%)
Strand=Plus/Plus
Query 58927 TCGGCACCCTGACCGCCGACCCCGAGCTGCGGTTCACCCAAGGTGGGCAGGCCGTCGCCA 58986
|||| | ||| || | ||||| |||||||| ||||||| || ||| || ||||
Sbjct 1125038 TCGGGAACCTCACGGGAGACCCGGAGCTGCGTTTCACCCCCTCGGGTGCGGCGGTGGCCA 1125097
Query 58987 ACTTCACCGTCGTGTCCAACGAACGCCGCCG-----CGACGCCCAGGGCAAC---TGGGT 59038
||||||| || | ||||| |||||| | |||| |||| ||| |||
Sbjct 1125098 ACTTCACGGTGGCGTCCA-----CGCCGCGGACCTTCGACCGCCAGTCGAACGAGTGGAA 1125152
Query 59039 CGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTGGC 59098
||||| ||| || ||| | |||||| | ||||||||||| ||||| |||||||| ||
Sbjct 1125153 GGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGAGAACGTCGC 1125212
Query 59099 GGAAAGCCTCCAGAAAGGCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCCTT 59158
||| || ||| ||| ||||||||||||||| ||| |||| |||||||| |
Sbjct 1125213 GGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGGGCCGCCTCGTCCAGCGCTCGTA 1125272
Query 59159 CGAGACCAAGGAGGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGCCC 59218
||||||| ||||| || |||||||||||| ||||| || |||| ||||||||||| ||
Sbjct 1125273 CGAGACCCGCGAGGGGGAGAAGCGCACCGTCGTCGAGCTGCAGGTGGACGAGATCGGTCC 1125332
Query 59219 GTCGCTGCG 59227
|| |||||
Sbjct 1125333 CTCCCTGCG 1125341
Score = 122 bits (134), Expect = 4e-23
Identities = 148/198 (75%), Gaps = 8/198 (4%)
Strand=Plus/Plus
Query 49032 CCACCCCAGGACCTAGCCGCCGAG-TCAGCAGTCCTCGGCGCCATGCTTCTCTCCAAGAA 49090
|| ||||||||| | ||||||||| | ||| || ||||||| |||||| || || ||| |
Sbjct 1128287 CCGCCCCAGGACGTCGCCGCCGAGATGAGC-GTGCTCGGCGGCATGCTGCTGTCGAAGGA 1128345
Query 49091 CGCCACCCCGGCCGTCATGGAG---ATTCTCAAGCCCGAGGACTTCTACCGCCCCAACCA 49147
||||| | ||| |||||| ||| || | | |||| |||||||||||| ||
Sbjct 1128346 CGCCATCGCGGACGTCATCGAGCAGATCCGCGGCTCCGA---CTTCTACCGCCCGGCGCA 1128402
Query 49148 CGCCACCGTCTACCAGATCATCACCGACCTCTACATGGCCGGTGAGTCCGCCGACGTCAT 49207
|| | ||||||| || |||| |||||||||| ||| ||| ||||||||| ||
Sbjct 1128403 CGAGATCGTCTACGAGTCGATCATCGACCTCTACGGTCGCGGCGAGCCCGCCGACGCGAT 1128462
Query 49208 CACCGTCGCCGCGGAGCT 49225
|||||||| |||||||||
Sbjct 1128463 CACCGTCGTCGCGGAGCT 1128480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 237319742785852
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |