Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq139 136 6e-27 seq196 107 3e-18 seq4 100 4e-16 seq7730 96.9 5e-15 seq8561 86.0 1e-11 >seq139 Length=48224 Score = 136 bits (150), Expect = 6e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | ||||| ||||||| || || || || | || || ||| | || Sbjct 32485 TGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCG 32544 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| | || || |||| |||||| ||| || ||||| ||||| || ||||||| Sbjct 32545 ACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAAC 32604 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | |||||||| ||||| ||| | || || |||||| || | || || || | Sbjct 32605 AAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACCTTGTCTGACTACAACA 32664 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||| ||||| ||| | || || || || |||| ||||| |||| Sbjct 32665 TCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGTA 32712 Score = 87.8 bits (96), Expect = 3e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || || || || ||||| || || | || || ||| | || Sbjct 32029 TGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCCG 32088 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | || || || ||||| ||| || ||||| || || || ||||||| Sbjct 32089 ATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAAC 32148 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | || ||||| ||||| || |||| || ||||||| | | ||||| || | Sbjct 32149 AAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAACA 32208 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || || || || || | ||| | || || | ||||||| |||| Sbjct 32209 TTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGGTA 32256 >seq196 Length=33893 Score = 107 bits (118), Expect = 3e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146046 AAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAAT 146105 || || || || || || || || ||| | || || ||| | || |||||| | ||| Sbjct 3439 AAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAAT 3380 Query 146106 GTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTT 146165 || || || || ||| || ||||| || ||||| || ||||||||| | || ||| Sbjct 3379 GTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTT 3320 Query 146166 GCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCG 146225 || ||||| ||||| || || |||||| || | || || || || ||||||||||| Sbjct 3319 GCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAATCC 3260 Query 146226 ACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 ||| | || ||||| || |||| ||||| |||| Sbjct 3259 ACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTA 3226 >seq4 Length=403504 Score = 100 bits (110), Expect = 4e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || || || || || || |||||| | || || || || Sbjct 386535 TGCAGATTTTCGTCAAGACTTTGACTGGTAAGACCATTACTTTGGAGGTCGAGTCCTCCG 386594 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | || || || || || ||| || ||||| ||||| || || |||| Sbjct 386595 ACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAAC 386654 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| |||||||| ||||| ||| | || ||| |||||| || |||| ||||| | Sbjct 386655 AAAGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAACTTTGTCAGACTATAACA 386714 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||| || || ||| | || || || || || | ||||| |||| Sbjct 386715 TCCAAAAGGAGTCTACTCTTCACTTGGTCTTGAGACTGAGAGGTGGTA 386762 Score = 96.9 bits (106), Expect = 5e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 146127 AAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGAT 146186 || ||||| ||||| || || ||||||||||| |||||||| ||||| ||| | || ||| Sbjct 386858 AAGGAAGGTATTCCTCCAGACCAACAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGAT 386917 Query 146187 AATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGA 146246 |||||| || |||| ||||| || ||||| || || ||| | || || || || || Sbjct 386918 GGTAGAACTTTGTCAGACTATAACATCCAAAAGGAGTCTACTCTTCACTTGGTCTTGAGA 386977 Query 146247 TTAAGAGGAGGTA 146259 | ||||| |||| Sbjct 386978 CTGAGAGGTGGTA 386990 Score = 96.9 bits (106), Expect = 5e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 146127 AAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGAT 146186 || ||||| ||||| || || ||||||||||| |||||||| ||||| ||| | || ||| Sbjct 387086 AAGGAAGGTATTCCTCCAGACCAACAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGAT 387145 Query 146187 AATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGA 146246 |||||| || |||| ||||| || ||||| || || ||| | || || || || || Sbjct 387146 GGTAGAACTTTGTCAGACTATAACATCCAAAAGGAGTCTACTCTTCACTTGGTCTTGAGA 387205 Query 146247 TTAAGAGGAGGTA 146259 | ||||| |||| Sbjct 387206 CTGAGAGGTGGTA 387218 >seq7730 Length=350 Score = 96.9 bits (106), Expect = 5e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146052 TTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAATGTAAAA 146111 || || || ||||| || || | || || ||| | |||||| || | || || || Sbjct 2 TTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCCGATACCATCGACAACGTTAAG 61 Query 146112 AATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGT 146171 ||||| ||| || ||||| || || || |||||||||||| | || ||||| ||| Sbjct 62 TCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAACAAAGATTGATCTTTGCCGGT 121 Query 146172 AAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATC 146231 || || ||||| || |||||| || | || || || || ||||| ||||| ||| | Sbjct 122 AAGCAGTTAGAAGACGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCTACTCTT 181 Query 146232 CATTTAGTATTACGATTAAGAGGAGGTA 146259 || || || || |||| ||||| |||| Sbjct 182 CACTTGGTGTTGAGATTGAGAGGTGGTA 209 >seq8561 Length=249 Score = 86.0 bits (94), Expect = 1e-11 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 146115 AAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAA 146174 ||||| ||| || ||||| || || || |||||||||||| | || ||||| ||||| Sbjct 21 AAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAACAAAGATTGATCTTTGCCGGTAAG 80 Query 146175 CAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCAT 146234 || |||| || ||||||| | | ||||| || || || || ||||| ||| | || Sbjct 81 CAGCTAGAAGACGGTAGAACGCTGTCTGATTACAACATTCAGAAGGAATCTACTCTTCAC 140 Query 146235 TTAGTATTACGATTAAGAGGAGGTA 146259 || || || |||| ||||| |||| Sbjct 141 TTGGTGTTGAGATTGAGAGGTGGTA 165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786073121356640