Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_023498.1
Length=62466
Score E
Sequences producing significant alignments: (Bits) Value
seq6 114 5e-21
>seq6
Length=371824
Score = 114 bits (126), Expect = 5e-21
Identities = 456/686 (66%), Gaps = 55/686 (8%)
Strand=Plus/Plus
Query 56168 CAGCTCGGCACCCTCGGCGGCGGTAACCATTTCATCGAGCTGTGCCTCGATCACCTTGAC 56227
|||||||| ||||| ||||| || ||||| ||| ||||||||||| || |||| |||
Sbjct 98660 CAGCTCGGGACCCTGGGCGGGGGAAACCACTTCGTCGAGCTGTGCACGGA-CACC--GAC 98716
Query 56228 CGG---GTGTGGCTGTTCCTGCACTCCGGTTCGCGTGGCGTCGGCAACAAGATCGCCCAG 56284
|| || ||||| |||||||| || ||||| | ||||||| | | |||| ||
Sbjct 98717 GGGCAGGTCTGGCTCCAGCTGCACTCGGGGTCGCGCAACATCGGCAAGACGCTCGCGGAG 98776
Query 56285 CGGCATATCTCTGCGGCGCAGGGGTATTGC--CAGGCGCAAGGGCTGCACGTCCCGCACC 56342
| ||| || | | ||| || | | || || || ||||| |||| |||
Sbjct 98777 CAGCACGTCGCGGTCGCGAAGCG--ACTGGAGCACAACCAGGGGCT---CGTCG---ACC 98828
Query 56343 GCGACCTCGC---GTACCTCGTCGAGGGCACTGTCGAGTTCGACCGCTACCTCGTCGAGC 56399
|||| ||||| || ||||| || |||| ||| | ||| ||||||| ||| |
Sbjct 98829 GCGAGCTCGCCGTGTTCCTCGGCG---GCACGCCGGAGATGGACGCGTACCTCGCCGACC 98885
Query 56400 TGCGGTGGGCGCAGCGGTTCGCGTACTACAACCGCGCCGAGATGATG--GACCGTT-TCG 56456
|| ||||||||||| || |||| | ||||| | |||||| | ||| |||
Sbjct 98886 TGTGGTGGGCGCAGGAGTACGCGGCGCGCTCGCGCGCGGTCATGATGACGCTCGTGGTCG 98945
Query 56457 -CGCAG-GCGTTCCGGCATTGGATCGGCGCCGACGCCCCGATCGACGAGCTGGTCGTCGA 56514
||| | ||| | | | || |||| ||| | || |||||||| | ||| ||
Sbjct 98946 ACGCCGTGCGCGC-GTCGTTCCC-CGGCCGCGAGATCGCGTTCGACGAG---GCCGT-GA 98999
Query 56515 GACGATCAACACGCATCACAACTACA-CGCAGAAGGAGCTGCACGGCGGCCGTGAGGT-G 56572
||| || || ||||||||| ||| | | ||| || ||||| ||| | |
Sbjct 99000 -ACG-TCCAC------CACAACTACGTCGCGGTCG-AGCACGTCGACGGCCAGGAGCTCG 99050
Query 56573 TGGTTGACCCGCAAGGGTGCGATCGACGCGCACG--AGGGTGTGCGGGGCCTGATTCCCG 56630
| || |||||||||||| |||||| || || | |||| | | || || || || |
Sbjct 99051 TCGT-GACCCGCAAGGGCGCGATC--CGGGCCGGGAAGGGCGACCTCGGGCTCATCCCGG 99107
Query 56631 GCAGCATGGGCACTTGCTCGTATGTCGTGA-CGGGCAAGGGCAATCCCGAGGCG--CTGC 56687
| ||||||||| ||||||| ||||| ||||| ||| || || ||| || |||
Sbjct 99108 GGTCCATGGGCACCGGCTCGTACATCGTGCGCGGGCTCGGG-AACCCGGAGTCGTACTGG 99166
Query 56688 ATTCTGCGCCGCACGGCGCCGGTCGCCGGTTCTCGCGCGCCAAGGCCCGAAAGCTGTTCA 56747
|| ||| ||||||| || || || || | |||||| | ||||| ||| ||||
Sbjct 99167 --TCGGCGTCGCACGGTGCGGGCCGTCGCATGTCGCGCACGAAGGCGAAGAAGACCTTCA 99224
Query 56748 CGGTCGACGACCTCGCCGACCGTATGCAGGGCATCGAGTACCGGCACGGCGAGGCGTGGG 56807
|| ||||||||||||||| || | | ||| | |||| ||| | | || | | |
Sbjct 99225 CGCTCGACGACCTCGCCGCCCAGACGACCGGCGTGGAGTGCCGCAAGGACGCCGGGGTGC 99284
Query 56808 TCGATGAGATTCCCGACGCCTACAAG 56833
|||| ||||| || | ||||||||||
Sbjct 99285 TCGACGAGATCCCGGCCGCCTACAAG 99310
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 199743290273724
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |