Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_023498.1 Length=62466 Score E Sequences producing significant alignments: (Bits) Value seq6 114 5e-21 >seq6 Length=371824 Score = 114 bits (126), Expect = 5e-21 Identities = 456/686 (66%), Gaps = 55/686 (8%) Strand=Plus/Plus Query 56168 CAGCTCGGCACCCTCGGCGGCGGTAACCATTTCATCGAGCTGTGCCTCGATCACCTTGAC 56227 |||||||| ||||| ||||| || ||||| ||| ||||||||||| || |||| ||| Sbjct 98660 CAGCTCGGGACCCTGGGCGGGGGAAACCACTTCGTCGAGCTGTGCACGGA-CACC--GAC 98716 Query 56228 CGG---GTGTGGCTGTTCCTGCACTCCGGTTCGCGTGGCGTCGGCAACAAGATCGCCCAG 56284 || || ||||| |||||||| || ||||| | ||||||| | | |||| || Sbjct 98717 GGGCAGGTCTGGCTCCAGCTGCACTCGGGGTCGCGCAACATCGGCAAGACGCTCGCGGAG 98776 Query 56285 CGGCATATCTCTGCGGCGCAGGGGTATTGC--CAGGCGCAAGGGCTGCACGTCCCGCACC 56342 | ||| || | | ||| || | | || || || ||||| |||| ||| Sbjct 98777 CAGCACGTCGCGGTCGCGAAGCG--ACTGGAGCACAACCAGGGGCT---CGTCG---ACC 98828 Query 56343 GCGACCTCGC---GTACCTCGTCGAGGGCACTGTCGAGTTCGACCGCTACCTCGTCGAGC 56399 |||| ||||| || ||||| || |||| ||| | ||| ||||||| ||| | Sbjct 98829 GCGAGCTCGCCGTGTTCCTCGGCG---GCACGCCGGAGATGGACGCGTACCTCGCCGACC 98885 Query 56400 TGCGGTGGGCGCAGCGGTTCGCGTACTACAACCGCGCCGAGATGATG--GACCGTT-TCG 56456 || ||||||||||| || |||| | ||||| | |||||| | ||| ||| Sbjct 98886 TGTGGTGGGCGCAGGAGTACGCGGCGCGCTCGCGCGCGGTCATGATGACGCTCGTGGTCG 98945 Query 56457 -CGCAG-GCGTTCCGGCATTGGATCGGCGCCGACGCCCCGATCGACGAGCTGGTCGTCGA 56514 ||| | ||| | | | || |||| ||| | || |||||||| | ||| || Sbjct 98946 ACGCCGTGCGCGC-GTCGTTCCC-CGGCCGCGAGATCGCGTTCGACGAG---GCCGT-GA 98999 Query 56515 GACGATCAACACGCATCACAACTACA-CGCAGAAGGAGCTGCACGGCGGCCGTGAGGT-G 56572 ||| || || ||||||||| ||| | | ||| || ||||| ||| | | Sbjct 99000 -ACG-TCCAC------CACAACTACGTCGCGGTCG-AGCACGTCGACGGCCAGGAGCTCG 99050 Query 56573 TGGTTGACCCGCAAGGGTGCGATCGACGCGCACG--AGGGTGTGCGGGGCCTGATTCCCG 56630 | || |||||||||||| |||||| || || | |||| | | || || || || | Sbjct 99051 TCGT-GACCCGCAAGGGCGCGATC--CGGGCCGGGAAGGGCGACCTCGGGCTCATCCCGG 99107 Query 56631 GCAGCATGGGCACTTGCTCGTATGTCGTGA-CGGGCAAGGGCAATCCCGAGGCG--CTGC 56687 | ||||||||| ||||||| ||||| ||||| ||| || || ||| || ||| Sbjct 99108 GGTCCATGGGCACCGGCTCGTACATCGTGCGCGGGCTCGGG-AACCCGGAGTCGTACTGG 99166 Query 56688 ATTCTGCGCCGCACGGCGCCGGTCGCCGGTTCTCGCGCGCCAAGGCCCGAAAGCTGTTCA 56747 || ||| ||||||| || || || || | |||||| | ||||| ||| |||| Sbjct 99167 --TCGGCGTCGCACGGTGCGGGCCGTCGCATGTCGCGCACGAAGGCGAAGAAGACCTTCA 99224 Query 56748 CGGTCGACGACCTCGCCGACCGTATGCAGGGCATCGAGTACCGGCACGGCGAGGCGTGGG 56807 || ||||||||||||||| || | | ||| | |||| ||| | | || | | | Sbjct 99225 CGCTCGACGACCTCGCCGCCCAGACGACCGGCGTGGAGTGCCGCAAGGACGCCGGGGTGC 99284 Query 56808 TCGATGAGATTCCCGACGCCTACAAG 56833 |||| ||||| || | |||||||||| Sbjct 99285 TCGACGAGATCCCGGCCGCCTACAAG 99310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199743290273724