Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq170 105 8e-18 >seq170 Length=39039 Score = 105 bits (116), Expect = 8e-18 Identities = 210/304 (69%), Gaps = 8/304 (3%) Strand=Plus/Minus Query 171666 AGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTT-ATGCGGGTTTA 171724 ||||||||| ||||| | | |||||| |||||||||| ||||||| ||| ||||| | Sbjct 19148 AGGTGTTAAGATTTGGGACGGTAATGGATCTCGTGAATATTTAGATAAGATG-GGGTTCA 19090 Query 171725 CTGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGG 171784 || || |||| ||| ||| | || || ||||||||||||||||||| ||| || | Sbjct 19089 AAGATAGGAAAGTAGGAGATCTGGGGCCCGTTTATGGATTTCAATGGAGGCATTTTGGTG 19030 Query 171785 CTCAATATATCGAC-TGTTATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAA 171843 || |||| | ||| || || || || || |||||||| | || ||||| | || Sbjct 19029 CTAAATACA-AGACGTGCGATGACGACTATACTGGACAAGGTATTGATCAATTGAAACAG 18971 Query 171844 ACTATTAAT--ACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGA 171901 |||| || |||| | | | || || | |||||| || | || | |||| Sbjct 18970 GTTATTCATAAACTTAAGACA--AATCCCTACGATAGAAGAATCATTATGAGTGCCTGGA 18913 Query 171902 ATGTACCTCAACTTGATAAAATGGTTCTTCCTCCTTGCCACACTTTAGCACAATTTTATG 171961 | | || | |||| ||||||| | | || || ||||| | ||| |||| || |||| Sbjct 18912 ACCCAGCTGATTTTGACAAAATGGCTTTGCCACCATGCCATATTTTTTCACAGTTCTATG 18853 Query 171962 TCAG 171965 |||| Sbjct 18852 TCAG 18849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628456624773120