Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_023724.1 Length=62991 Score E Sequences producing significant alignments: (Bits) Value seq6 93.3 2e-14 seq2 86.0 3e-12 >seq6 Length=371824 Score = 93.3 bits (102), Expect = 2e-14 Identities = 222/327 (68%), Gaps = 24/327 (7%) Strand=Plus/Plus Query 52713 GTCAACGCGCACCACAACTACA---CGGTGCAGGAATGCGTCGACGGT---GAGCTGGTG 52766 || |||| |||||||||||| |||| || | ||||||||| ||||| || Sbjct 98996 GTGAACGTCCACCACAACTACGTCGCGGTCGAGCA---CGTCGACGGCCAGGAGCTCGTC 99052 Query 52767 TGGGTGACCCGCAAGGGTGCCATCAG---CGCGAAGCTCGGCGAGCGTGGCCTGATCCCG 52823 |||||||||||||| || ||| | || |||| ||||| | || || |||||| Sbjct 99053 ---GTGACCCGCAAGGGCGCGATCCGGGCCGGGAAG---GGCGACCTCGGGCTCATCCCG 99106 Query 52824 GGAAGCATGGGCACCGCATCCTATGTCGT-CACCGGCAAGGGCAACCCGCAG--GGTCTG 52880 || ||||||||||| || || |||| | | ||| ||| |||||| || | ||| Sbjct 99107 GGGTCCATGGGCACCGGCTCGTACATCGTGCGCGGGCTCGGG-AACCCGGAGTCGTACTG 99165 Query 52881 CAGTCTGCGCCTCACGGCGCCGGCCGAAGGTTCTCCCGAACCAAAGCTCGCAAGCTGTTC 52940 ||| ||| | ||||| || ||||| | | || || || || || ||| ||| Sbjct 99166 --GTCGGCGTCGCACGGTGCGGGCCGTCGCATGTCGCGCACGAAGGCGAAGAAGACCTTC 99223 Query 52941 ACCGTCGACGACCTGGCTGACCGTATGCGCGGCATCGAGTACCGCCACGGTGAGGCGTGG 53000 || |||||||||| || | || | | |||| | |||| |||| | | | | | | Sbjct 99224 ACGCTCGACGACCTCGCCGCCCAGACGACCGGCGTGGAGTGCCGCAAGGACGCCGGGGTG 99283 Query 53001 GTCGACGAAATCCCGGACGCTTACAAG 53027 ||||||| ||||||| ||| |||||| Sbjct 99284 CTCGACGAGATCCCGGCCGCCTACAAG 99310 >seq2 Length=464139 Score = 86.0 bits (94), Expect = 3e-12 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 597 GCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTG 651 || |||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 48408 GCGCAATTGGTAGCGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGAGTCCTG 48462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 201423095925024