Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_023733.1 Length=154573 Score E Sequences producing significant alignments: (Bits) Value seq17 111 2e-19 seq9491 84.2 2e-11 >seq17 Length=237104 Score = 111 bits (122), Expect = 2e-19 Identities = 114/147 (78%), Gaps = 4/147 (3%) Strand=Plus/Plus Query 114467 CGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTAGTCACCTACGTCATGGGCATCACCTC 114526 |||||||||||||||||| |||| ||||| | | | ||||| |||||||||||||| Sbjct 190498 CGGCCCGGGCCGTGGCTCGGCCGCGGGCTCCATGGCCTCCTACCTCATGGGCATCACCGA 190557 Query 114527 GATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTTATCAACCCGGACC--GCCCC 114584 | |||||||| | || ||| ||||| |||||||| || ||||||| || | | | Sbjct 190558 GCTCGACCCGCTGGAGCACGGGCTGATCTTCGAGCGGTTCCTCAACCCCGAGCGTGTGTC 190617 Query 114585 GACTTCCCCGACATCGACGTCGACTTC 114611 || | |||||| |||||||||||||| Sbjct 190618 GA--TGCCCGACGTCGACGTCGACTTC 190642 >seq9491 Length=867449 Score = 84.2 bits (92), Expect = 2e-11 Identities = 71/85 (84%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 91238 CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGTTGTCGCAGGTTCGAA 91297 |||||||| | ||| |||| || |||||| ||| ||||| ||| ||||||||||| || Sbjct 798028 CGGGGTGTGGCGCAGCTTGGTAGCGCGCTTCGTTCGGGACGAAGAGGTCGCAGGTTCAAA 797969 Query 91298 TCCTGTCACCCCGACTCAG-CGAGA 91321 ||||||||||||||| ||| ||||| Sbjct 797968 TCCTGTCACCCCGAC-CAGCCGAGA 797945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494446926910560