Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_023738.1
Length=106327
Score E
Sequences producing significant alignments: (Bits) Value
seq17 172 4e-38
seq9489 131 1e-25
>seq17
Length=237104
Score = 172 bits (190), Expect = 4e-38
Identities = 241/336 (72%), Gaps = 3/336 (1%)
Strand=Plus/Minus
Query 94435 TCGGAGACGAACGCGCCCTGTATCCGGATGGCGCTGCGCGCCCCCACCGGCAGGAATAAC 94494
|| ||||| |||||||||| | || |||| || ||| |||| |||||||| |
Sbjct 111858 TCCGAGACCCACGCGCCCTGCACGCGCATGGGCTTGGCCGCGCCCATGGGCAGGAACAGG 111799
Query 94495 CCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTCGTCCAGGATCACCCGGCTATCG 94554
|||| ||| || ||||||| ||| || ||| || ||| || | || || ||
Sbjct 111798 GCGTCGCCCTGGCCGATGAGCTTCTCCGCGCCGGGCTGGTCGAGCACGACGCGCGAGTCC 111739
Query 94555 GTGAGGGACGCTGTGGCGAACGACAGCCGCGAGGGCACGTTGCTCTTGATGAGGCCCGTC 94614
| |||||||| || ||||||| |||||||| |||||||| ||||||||||||||||
Sbjct 111738 GCGAGGGACGACGTCGCGAACGCGAGCCGCGACGGCACGTTCGCCTTGATGAGGCCCGTC 111679
Query 94615 ACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATGCCGGCCGCACGCGCC 94674
|| || || || || || ||||||||||| || || || || ||||| ||||| |||||
Sbjct 111678 ACGACGTCGACCGACGGGCGCTGCGTCGCGAGCACCAGGTGGATGCCCGCCGCGCGCGCG 111619
Query 94675 TTCTGCGCGATGCGGACAATGTTGGCCTCAACCTCTTTCTTGTAGCCACCCATCATGAGG 94734
||||| |||||| || |||||| || || | | || | |||||||||||
Sbjct 111618 AGCTGCGTGATGCGCTGGATCGAGGCCTCGACGTC--GCGCGGGGCGA-CCATCATGAGG 111562
Query 94735 TCCGCGAGTTCATCCACCACTACCACGATGTAGGGG 94770
|| ||||| || || || || |||| | ||| |||
Sbjct 111561 TCGGCGAGCTCGTCGACGACGACCAGCAGGTACGGG 111526
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 94897 AGGTGGGGGATACCGTTGTACGGGGTGAGCTCGACACATTTGGGGTCGATCATGATGAGT 94956
||||| ||||| || | ||| || |||||||| | |||||||| | | | |||
Sbjct 111339 AGGTGCGGGATGCCCTCGTAGATCGTCAGCTCGACGCGCTTGGGGTCCACGAGCACGAGC 111280
Query 94957 TTGACCCGATCAGGGGTCGCCCGGTAGAGCAGCGAAACCAGCATTGAGTTGATGAAGCTG 95016
||| | || || |||| || ||| | ||| | ||| ||||||||||||||
Sbjct 111279 CGCACCTGCTCGGGCGTCGATCGCATGAGGATCGACGTGATCATGGAGTTGATGAAGCTC 111220
Query 95017 GACTTGCCCGATCCGGTCGCGCCAGCCACCAGCAGATGCGGCATCTTGGCCAGGTTCAGG 95076
|||||||||| || |||||||| || || || | || |||||||| || |||||| |
Sbjct 111219 GACTTGCCCGCGCCCGTCGCGCCCGCGACGAGGATGTGGGGCATCTTCGCGAGGTTCGCG 111160
Query 95077 GAGACGTCCTTACCCTCGACGTCCTTGCCCAC 95108
||||| ||||||||||||||||| ||
Sbjct 111159 ACGACGTAGCCGCCCTCGACGTCCTTGCCGAC 111128
>seq9489
Length=379987
Score = 131 bits (144), Expect = 1e-25
Identities = 225/323 (70%), Gaps = 4/323 (1%)
Strand=Plus/Minus
Query 96461 CAGGTAGTAGGGTTTGTCGAGCAGGATCGGGTCGACCTCCCCGGCCGGCACGAACTCCAC 96520
|||||||||| ||||||||||| |||||||| || | || |||||||||||||||
Sbjct 200934 CAGGTAGTAGCTGCGGTCGAGCAGGAGCGGGTCGATCTGCTCGCTCGGCACGAACTCCAC 200875
Query 96521 GACGTCAATCACCTTGTTGGTTTCGCTGGGCAGCTCCGCCAAGTCCTCATTGGTCAGTAG 96580
||| || ||| | | || ||| ||| ||| | || |||||||| | ||||| |
Sbjct 200874 GACCTCGATCTCACGGCTGCGCTCGGCGGGGAGCGCGGCGAAGTCCTCGCTCGTCAGCAC 200815
Query 96581 GGCGGTTTGCCCGTCGACCTCGAACACCTTGCCCAGATCGGC-CGTGTGG-ACCTGCTCA 96638
| |||| || || || | ||| || ||||| | ||| || ||| || || |||
Sbjct 200814 GACGGTGCGCTCGCCGTCGTCGTACGCCTTGTC--GATGTGCTCGTACGGCACGACCTCG 200757
Query 96639 CCACACGTCTCACAGACCTTGTGGTAGCGAATCCGCCCGCCGTCCTGGACGTGCGCCAGA 96698
|| |||| || || ||||||| || || |||||||||| | |||| || |
Sbjct 200756 CCGTCGATCTCGCACACGCGCCGGTAGCGGATGCGGCCGCCGTCCTTGTCGTGGACCTGG 200697
Query 96699 TGGCCCTTCAGGTCGTGTTCCTCGGTGGCCGCGTACATCTTCACCGGCACGTTGACCAAC 96758
|| | || |||||| ||||| || || | ||||| ||| |||||||||||||| |
Sbjct 200696 TGCAGCGGCACGTCGTGGTCCTCCGTCGCGGAGTACACCTTGACCGGCACGTTGACGAGG 200637
Query 96759 CCGAAGTTTACCGCGCCTGTCCA 96781
||||| | | ||||| ||||
Sbjct 200636 CCGAACGTGATGGCGCCCTTCCA 200614
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340082253457856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |