Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_023738.1 Length=106327 Score E Sequences producing significant alignments: (Bits) Value seq17 172 4e-38 seq9489 131 1e-25 >seq17 Length=237104 Score = 172 bits (190), Expect = 4e-38 Identities = 241/336 (72%), Gaps = 3/336 (1%) Strand=Plus/Minus Query 94435 TCGGAGACGAACGCGCCCTGTATCCGGATGGCGCTGCGCGCCCCCACCGGCAGGAATAAC 94494 || ||||| |||||||||| | || |||| || ||| |||| |||||||| | Sbjct 111858 TCCGAGACCCACGCGCCCTGCACGCGCATGGGCTTGGCCGCGCCCATGGGCAGGAACAGG 111799 Query 94495 CCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTCGTCCAGGATCACCCGGCTATCG 94554 |||| ||| || ||||||| ||| || ||| || ||| || | || || || Sbjct 111798 GCGTCGCCCTGGCCGATGAGCTTCTCCGCGCCGGGCTGGTCGAGCACGACGCGCGAGTCC 111739 Query 94555 GTGAGGGACGCTGTGGCGAACGACAGCCGCGAGGGCACGTTGCTCTTGATGAGGCCCGTC 94614 | |||||||| || ||||||| |||||||| |||||||| |||||||||||||||| Sbjct 111738 GCGAGGGACGACGTCGCGAACGCGAGCCGCGACGGCACGTTCGCCTTGATGAGGCCCGTC 111679 Query 94615 ACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATGCCGGCCGCACGCGCC 94674 || || || || || || ||||||||||| || || || || ||||| ||||| ||||| Sbjct 111678 ACGACGTCGACCGACGGGCGCTGCGTCGCGAGCACCAGGTGGATGCCCGCCGCGCGCGCG 111619 Query 94675 TTCTGCGCGATGCGGACAATGTTGGCCTCAACCTCTTTCTTGTAGCCACCCATCATGAGG 94734 ||||| |||||| || |||||| || || | | || | ||||||||||| Sbjct 111618 AGCTGCGTGATGCGCTGGATCGAGGCCTCGACGTC--GCGCGGGGCGA-CCATCATGAGG 111562 Query 94735 TCCGCGAGTTCATCCACCACTACCACGATGTAGGGG 94770 || ||||| || || || || |||| | ||| ||| Sbjct 111561 TCGGCGAGCTCGTCGACGACGACCAGCAGGTACGGG 111526 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 94897 AGGTGGGGGATACCGTTGTACGGGGTGAGCTCGACACATTTGGGGTCGATCATGATGAGT 94956 ||||| ||||| || | ||| || |||||||| | |||||||| | | | ||| Sbjct 111339 AGGTGCGGGATGCCCTCGTAGATCGTCAGCTCGACGCGCTTGGGGTCCACGAGCACGAGC 111280 Query 94957 TTGACCCGATCAGGGGTCGCCCGGTAGAGCAGCGAAACCAGCATTGAGTTGATGAAGCTG 95016 ||| | || || |||| || ||| | ||| | ||| |||||||||||||| Sbjct 111279 CGCACCTGCTCGGGCGTCGATCGCATGAGGATCGACGTGATCATGGAGTTGATGAAGCTC 111220 Query 95017 GACTTGCCCGATCCGGTCGCGCCAGCCACCAGCAGATGCGGCATCTTGGCCAGGTTCAGG 95076 |||||||||| || |||||||| || || || | || |||||||| || |||||| | Sbjct 111219 GACTTGCCCGCGCCCGTCGCGCCCGCGACGAGGATGTGGGGCATCTTCGCGAGGTTCGCG 111160 Query 95077 GAGACGTCCTTACCCTCGACGTCCTTGCCCAC 95108 ||||| ||||||||||||||||| || Sbjct 111159 ACGACGTAGCCGCCCTCGACGTCCTTGCCGAC 111128 >seq9489 Length=379987 Score = 131 bits (144), Expect = 1e-25 Identities = 225/323 (70%), Gaps = 4/323 (1%) Strand=Plus/Minus Query 96461 CAGGTAGTAGGGTTTGTCGAGCAGGATCGGGTCGACCTCCCCGGCCGGCACGAACTCCAC 96520 |||||||||| ||||||||||| |||||||| || | || ||||||||||||||| Sbjct 200934 CAGGTAGTAGCTGCGGTCGAGCAGGAGCGGGTCGATCTGCTCGCTCGGCACGAACTCCAC 200875 Query 96521 GACGTCAATCACCTTGTTGGTTTCGCTGGGCAGCTCCGCCAAGTCCTCATTGGTCAGTAG 96580 ||| || ||| | | || ||| ||| ||| | || |||||||| | ||||| | Sbjct 200874 GACCTCGATCTCACGGCTGCGCTCGGCGGGGAGCGCGGCGAAGTCCTCGCTCGTCAGCAC 200815 Query 96581 GGCGGTTTGCCCGTCGACCTCGAACACCTTGCCCAGATCGGC-CGTGTGG-ACCTGCTCA 96638 | |||| || || || | ||| || ||||| | ||| || ||| || || ||| Sbjct 200814 GACGGTGCGCTCGCCGTCGTCGTACGCCTTGTC--GATGTGCTCGTACGGCACGACCTCG 200757 Query 96639 CCACACGTCTCACAGACCTTGTGGTAGCGAATCCGCCCGCCGTCCTGGACGTGCGCCAGA 96698 || |||| || || ||||||| || || |||||||||| | |||| || | Sbjct 200756 CCGTCGATCTCGCACACGCGCCGGTAGCGGATGCGGCCGCCGTCCTTGTCGTGGACCTGG 200697 Query 96699 TGGCCCTTCAGGTCGTGTTCCTCGGTGGCCGCGTACATCTTCACCGGCACGTTGACCAAC 96758 || | || |||||| ||||| || || | ||||| ||| |||||||||||||| | Sbjct 200696 TGCAGCGGCACGTCGTGGTCCTCCGTCGCGGAGTACACCTTGACCGGCACGTTGACGAGG 200637 Query 96759 CCGAAGTTTACCGCGCCTGTCCA 96781 ||||| | | ||||| |||| Sbjct 200636 CCGAACGTGATGGCGCCCTTCCA 200614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340082253457856