Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_023744.1 Length=60588 Score E Sequences producing significant alignments: (Bits) Value seq6 104 9e-18 >seq6 Length=371824 Score = 104 bits (114), Expect = 9e-18 Identities = 140/192 (73%), Gaps = 5/192 (3%) Strand=Plus/Plus Query 49420 ATGCCCGACGCGCACGCCGGCAAGGGTTCATCGGTCGGCACCGTCATCCCGACTATCGAC 49479 |||||||||| ||| |||||||| | | |||||| | |||||| ||| |||| Sbjct 98312 ATGCCCGACGTCCACCTGGGCAAGGGCGCGACCGTCGGCTCGGTCATCGCGATGCGCGAC 98371 Query 49480 GCCGTGATCCCGGCCGCGGTGGGCGTGGACATCGGCTGCGGGATGATCGCCGCCCGCACC 49539 |||||| || ||| || ||||| |||||||| ||||||||||||| || |||||| Sbjct 98372 GCCGTGTCGCCCAACGCCGTCGGCGTCGACATCGGGTGCGGGATGATCGGCGTCCGCACG 98431 Query 49540 ATCTACACCGAGGACGACCTGGACGGCCGGGACCTCGCCGCGCTGCG-GCACGCCATCGA 49598 | ||| | ||| |||||| || | ||||||| || | || || || |||||| Sbjct 98432 TCCCTCACGGCGGAGGACCTGCCCGAC---GACCTCGGACCGGTCCGCGCGCG-CATCGA 98487 Query 49599 GGGCGCGATCCC 49610 || ||||||||| Sbjct 98488 GGCCGCGATCCC 98499 Score = 89.7 bits (98), Expect = 2e-13 Identities = 181/263 (69%), Gaps = 12/263 (5%) Strand=Plus/Plus Query 50159 TGACCCGCAAGGGCGCCATCGACGC--GCACGCCGGCGTGATGGGCCTGATCCCGGGCAG 50216 |||||||||||||||| ||| || | | | |||| | || || |||||||| Sbjct 99054 TGACCCGCAAGGGCGCGATCCGGGCCGGGAAG--GGCGACCTCGGGCTCATCCCGGGGTC 99111 Query 50217 CATGGGCACCCCGTCATACGTGGTGCGCGGCAAGGGCAACCCGGCCGGGCTGTGCTCGGC 50276 |||||||||| || ||| | |||||||| || ||||||| | || ||||| Sbjct 99112 CATGGGCACCGGCTCGTACATCGTGCGCGGGCTCGGGAACCCGGAGTCGTACTGGTCGGC 99171 Query 50277 GCCGCACGGCGCCGGCCGCCGGCAT-TCCCGCACCCAAGCCCGGAAGCTGTTCACCGAGG 50335 | ||||||| || ||||| || ||| || ||||| | || |||| ||||| | Sbjct 99172 GTCGCACGGTGCGGGCCGTCG-CATGTCGCGCACGAAGGCGAAGAAGACCTTCACGCTCG 99230 Query 50336 CCGACCTCGCCGACCGGATGCAGGGTATCGAGTACCGGCACGGGGACGCGTGGG---TTG 50392 ||||||||||| || || | || | |||| ||| | |||||| ||| | | Sbjct 99231 ACGACCTCGCCGCCCAGACGACCGGCGTGGAGTGCCG---CAAGGACGCCGGGGTGCTCG 99287 Query 50393 ACGAAATCCCGGACGCCTACAAG 50415 |||| ||||||| |||||||||| Sbjct 99288 ACGAGATCCCGGCCGCCTACAAG 99310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193738159857200