Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_023744.1
Length=60588
Score E
Sequences producing significant alignments: (Bits) Value
seq6 104 9e-18
>seq6
Length=371824
Score = 104 bits (114), Expect = 9e-18
Identities = 140/192 (73%), Gaps = 5/192 (3%)
Strand=Plus/Plus
Query 49420 ATGCCCGACGCGCACGCCGGCAAGGGTTCATCGGTCGGCACCGTCATCCCGACTATCGAC 49479
|||||||||| ||| |||||||| | | |||||| | |||||| ||| ||||
Sbjct 98312 ATGCCCGACGTCCACCTGGGCAAGGGCGCGACCGTCGGCTCGGTCATCGCGATGCGCGAC 98371
Query 49480 GCCGTGATCCCGGCCGCGGTGGGCGTGGACATCGGCTGCGGGATGATCGCCGCCCGCACC 49539
|||||| || ||| || ||||| |||||||| ||||||||||||| || ||||||
Sbjct 98372 GCCGTGTCGCCCAACGCCGTCGGCGTCGACATCGGGTGCGGGATGATCGGCGTCCGCACG 98431
Query 49540 ATCTACACCGAGGACGACCTGGACGGCCGGGACCTCGCCGCGCTGCG-GCACGCCATCGA 49598
| ||| | ||| |||||| || | ||||||| || | || || || ||||||
Sbjct 98432 TCCCTCACGGCGGAGGACCTGCCCGAC---GACCTCGGACCGGTCCGCGCGCG-CATCGA 98487
Query 49599 GGGCGCGATCCC 49610
|| |||||||||
Sbjct 98488 GGCCGCGATCCC 98499
Score = 89.7 bits (98), Expect = 2e-13
Identities = 181/263 (69%), Gaps = 12/263 (5%)
Strand=Plus/Plus
Query 50159 TGACCCGCAAGGGCGCCATCGACGC--GCACGCCGGCGTGATGGGCCTGATCCCGGGCAG 50216
|||||||||||||||| ||| || | | | |||| | || || ||||||||
Sbjct 99054 TGACCCGCAAGGGCGCGATCCGGGCCGGGAAG--GGCGACCTCGGGCTCATCCCGGGGTC 99111
Query 50217 CATGGGCACCCCGTCATACGTGGTGCGCGGCAAGGGCAACCCGGCCGGGCTGTGCTCGGC 50276
|||||||||| || ||| | |||||||| || ||||||| | || |||||
Sbjct 99112 CATGGGCACCGGCTCGTACATCGTGCGCGGGCTCGGGAACCCGGAGTCGTACTGGTCGGC 99171
Query 50277 GCCGCACGGCGCCGGCCGCCGGCAT-TCCCGCACCCAAGCCCGGAAGCTGTTCACCGAGG 50335
| ||||||| || ||||| || ||| || ||||| | || |||| ||||| |
Sbjct 99172 GTCGCACGGTGCGGGCCGTCG-CATGTCGCGCACGAAGGCGAAGAAGACCTTCACGCTCG 99230
Query 50336 CCGACCTCGCCGACCGGATGCAGGGTATCGAGTACCGGCACGGGGACGCGTGGG---TTG 50392
||||||||||| || || | || | |||| ||| | |||||| ||| | |
Sbjct 99231 ACGACCTCGCCGCCCAGACGACCGGCGTGGAGTGCCG---CAAGGACGCCGGGGTGCTCG 99287
Query 50393 ACGAAATCCCGGACGCCTACAAG 50415
|||| ||||||| ||||||||||
Sbjct 99288 ACGAGATCCCGGCCGCCTACAAG 99310
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 193738159857200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |