Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_024366.1
Length=62661
Score E
Sequences producing significant alignments: (Bits) Value
seq6 105 3e-18
seq2 87.8 7e-13
>seq6
Length=371824
Score = 105 bits (116), Expect = 3e-18
Identities = 237/347 (68%), Gaps = 23/347 (7%)
Strand=Plus/Plus
Query 54173 CGAGATCGC---CGGCGAACGCGTCAACGCGCACCACAACTACACCACCCAGGAGCACAT 54229
||||||||| || ||| ||| |||| |||||||||||| | | |||||| |
Sbjct 98974 CGAGATCGCGTTCGACGAGGCCGTGAACGTCCACCACAACTACGTCGCGGTCGAGCACGT 99033
Query 54230 CAACGGT---GAGCTGGTGTGGGTGACCCGCAAGGGCGCCATCAGCGC--GCAACTCGGT 54284
| |||| ||||| || ||||||||||||||||| ||| | || | || ||
Sbjct 99034 CGACGGCCAGGAGCTCGTC---GTGACCCGCAAGGGCGCGATCCGGGCCGGGAAG--GGC 99088
Query 54285 GAGCGTGGCCTCATCCCCGGCAGCATGGGCACGGCCTCCTACGTCGTCACCGGTAAAGGC 54344
|| | || |||||||| || ||||||||| | ||| ||| |||| ||| ||
Sbjct 99089 GACCTCGGGCTCATCCCGGGGTCCATGGGCACCGGCTCGTACATCGTGCGCGGGCTCGGG 99148
Query 54345 AACCCCGAAGGG--CTGCATTCCGCGCCGCACGGCGCCGGCCGCCGCTACTCCCGCACCA 54402
||||| || | ||| || ||| ||||||| || ||||| ||| || ||||| |
Sbjct 99149 AACCCGGAGTCGTACTGG--TCGGCGTCGCACGGTGCGGGCCGTCGCATGTCGCGCACGA 99206
Query 54403 AGGCACGCAAGCTGTTCACCGTCGACGACCTCGCAGACCGTATGCGCGGCATCGAATACC 54462
|||| ||| ||||| ||||||||||||| | || | | |||| | || | ||
Sbjct 99207 AGGCGAAGAAGACCTTCACGCTCGACGACCTCGCCGCCCAGACGACCGGCGTGGAGTGCC 99266
Query 54463 GGCACGGTGAGGCGTGGG---TCGACGAGATTCCCGACGCCTACAAG 54506
||| | || || ||| |||||||||| || | ||||||||||
Sbjct 99267 -GCAAG--GACGCCGGGGTGCTCGACGAGATCCCGGCCGCCTACAAG 99310
>seq2
Length=464139
Score = 87.8 bits (96), Expect = 7e-13
Identities = 54/58 (93%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 828 GTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTG 885
|| || |||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 48405 GTGGCGCAATTGGTAGCGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGAGTCCTG 48462
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 200367218087064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |