Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 1e-14 seq139 93.3 4e-14 seq2504 82.4 7e-11 >seq4 Length=403504 Score = 95.1 bits (104), Expect = 1e-14 Identities = 122/168 (73%), Gaps = 3/168 (2%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| || ||||| || || |||| || | || ||||| ||||| || ||||||||| Sbjct 386688 TCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGAATACCTTCCTTG 386629 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| ||||| | || | |||||||| || ||| || || | || | | Sbjct 386628 TCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTCCAAAGTAATG 386569 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCA---TGGCTTATTTA 133670 || || || |||| ||| || ||||||||||||| || |||||||| Sbjct 386568 GTCTTACCAGTCAAAGTCTTGACGAAAATCTGCATAGTGTCTTATTTA 386521 >seq139 Length=48224 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||||| ||||||||| ||||| || |||||||| || ||| ||| || ||||| Sbjct 32231 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 32172 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| || || | || | | || || || |||||||| ||||||||||| ||| || Sbjct 32171 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTC-TTGAATTT 32113 Query 133577 TTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | | ||| | | || | || |||| | || || || | || | |||||| |||| Sbjct 32112 TCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGG 32053 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| ||| || |||||||||||||| Sbjct 32052 TCAAAGTCTTGACGAAAATCTGCAT 32028 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 ||| || |||||||| || || | || | || ||| || || |||||||| |||||||| Sbjct 32411 GTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTT 32352 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||| || ||| | | || | |||||||| || || || || | |||| Sbjct 32351 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 32292 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||||| ||||||| ||| || || || |||||||| Sbjct 32291 GGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 32256 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGG-ACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| || || |||||||| || || ||| || | || || || ||||| || Sbjct 32908 GTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA-TCTTCTAGTTGCTTACC 32850 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG-CT 133581 || |||| | | |||||||| ||||| || ||||||||||| ||| ||| | || Sbjct 32849 GGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC-TTGAATTTTCGACT 32791 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||||| | || || || | ||| | || || || || |||| Sbjct 32790 TAACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAG 32731 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| |||||||| ||||| Sbjct 32730 TTTTGACGAAAATTTGCAT 32712 >seq2504 Length=543 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| || | ||| || || |||| || | || ||| | ||||| || ||||||||| Sbjct 530 TCCTCCAGTTTCTTACCAGCAAAAATCAGTCTTTGTTGGGCTGGAGGAATACCTTCCTTG 471 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| ||||| | || | |||||||| || ||| || || | || | | Sbjct 470 TCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTCCAAAGTAATG 411 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || |||| ||| || |||||||||||||| Sbjct 410 GTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483363442122080