Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_025429.1
Length=156446
Score E
Sequences producing significant alignments: (Bits) Value
seq13 134 1e-26
seq6689 105 7e-18
>seq13
Length=283376
Score = 134 bits (148), Expect = 1e-26
Identities = 379/578 (66%), Gaps = 32/578 (6%)
Strand=Plus/Plus
Query 142243 TTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAGAAG 142302
||||| | ||| | || ||| | || || || ||||| || || || | ||||||
Sbjct 138425 TTCGGCCGCCAGCTCCGCTTCGACCTCGCGCAGGGCTTCCCGCTCATCACGACGAAGCGC 138484
Query 142303 CTGCATCTGAAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAACATC 142362
|||| || ||||| || | ||| || ||||||||||| ||||| ||||| |
Sbjct 138485 GTGCACCTCAAGTCCGTCGCCTACGAGCTGCTGTGGTTCCTGCGCGGCGACTCGAACGTG 138544
Query 142363 AAGTATCTTCACGATCACAACGTCAAGATCTGGGATGAATGGGCTGATGCCAATGGCAAC 142422
| || || || | | ||| |||||||| || ||||| || ||| | ||| |
Sbjct 138545 CGCTGGCTCCAGGAGCGCGGCGTGCGCATCTGGGACGAGTGGGCCGACGCCGACGGCGAG 138604
Query 142423 CTCGGACCTGTCTACGGCAAGCAGTGGATGTCCTGGACGAACCTCGTTGTCGCTGGAGAT 142482
||||| || ||||||||| |||||| || ||| ||| ||| |||
Sbjct 138605 CTCGGCCCCGTCTACGGCGTCCAGTGGCGCTCGTGGCCGA----------CGCCGGACG- 138653
Query 142483 GACGTCACAGACGAACCGATCGATCAG---ATCCGCCGGATCATTACTGACTTGAAGAAG 142539
| || ||| | ||| | | ||| ||| ||| | ||||| | ||
Sbjct 138654 GCCGCCAC-GTCGACCAGGTCGCGCAGGTGATCGAGCAGATCAGGGCGAAC--------- 138703
Query 142540 TCTCCTCATTCTCGTCGTCACATCGTCACCGCGTGGAACCCTGCTGAAGTCGACGACATG 142599
|| | || || || ||||||||| ||||||||||| | || |||| ||||||
Sbjct 138704 ---CCCGACTCGCGACGGCACATCGTCTCCGCGTGGAACGTCGGGGAGATCGAGGACATG 138760
Query 142600 GCACTTCCTCCGTGTCACATGATGTTCCAATTCCACGTCGACTCGAAGAAGCGTCTGTCA 142659
|| || || ||||| ||| | | ||||| ||| |||| | | || | || || ||
Sbjct 138761 GCGCTGCCGCCGTGCCACGCGTTCTTCCAGTTCTACGTGGCC--GACGGC-CGGCTCTCG 138817
Query 142660 TGCCAGCTGTATCAGCGTTCGGCAGACTGGTTCCTCGGCGTTCCGTTCAACATTGCTTCG 142719
|||||||| || ||||| ||||| ||| |||||||| || ||||||||||| || |||
Sbjct 138818 TGCCAGCTCTACCAGCGCTCGGCGGACCTCTTCCTCGGGGTGCCGTTCAACATCGCGTCG 138877
Query 142720 TACGCGCTTCTCACACAGCTCATTGCTCGCG-AATGCGGTCTGGAACTCGGAGACTTCGT 142778
|||||||| ||| || | | || |||| | ||| || || |||| ||||||||
Sbjct 138878 TACGCGCTGCTCGTCCACATGGTCGC-CGCGCAGACCGGCCTCGAGGTCGGCGACTTCGT 138936
Query 142779 CCACACCTTCGGCAATTCGCACATCTACGATACACACG 142816
||| ||| | |||||||||||| | ||||
Sbjct 138937 GTGGACCGGAGGCGACGTGCACATCTACGACAACCACG 138974
>seq6689
Length=433
Score = 105 bits (116), Expect = 7e-18
Identities = 186/266 (70%), Gaps = 5/266 (2%)
Strand=Plus/Plus
Query 142552 CGTCGTCACATCGTCACCGCGTGGAACCCTGCTGAAGTCGACGACATGGCACTTCCTCCG 142611
|| || ||||||||| ||| |||| || | || |||| |||||||| || || |||
Sbjct 72 CGACGGCACATCGTCGCCGGGTGGGACGTCGGGGAGATCGAGGACATGGCGCTGCCGCCG 131
Query 142612 TGTCACATGATGTTCCAATTCCACGTCGACTCGAAGAAGCGTCTGTCATGCCAGCTGTAT 142671
|| | | | | ||||| ||| ||| | | || | || || || |||||||| ||
Sbjct 132 TGCCGCGCGTTCTTCCAGTTCTACGGGGCC--GACGGC-CGGCTCTCGTGCCAGCTCTAC 188
Query 142672 CAGCGTTCGGCAGACTGGTTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGCTTCTC 142731
||||| ||||| ||| |||||||| || ||||||||||| || ||||||||||| |||
Sbjct 189 CAGCGCTCGGCGGACCTCTTCCTCGGGGTGCCGTTCAACATCGCGTCGTACGCGCTGCTC 248
Query 142732 ACACAGCTCATTG-CTCGCGAATGCGGTCTGGAACTCGGAGACTTCGTCCACACCTTCGG 142790
|| | | | ||||| | ||| || || |||| |||||||| ||| ||
Sbjct 249 GTCCACATGGTCGCCTCGC-AGACCGGCCTCGAGGTCGGCGACTTCGTGTGGACCGGAGG 307
Query 142791 CAATTCGCACATCTACGATACACACG 142816
| | |||||||||||| | ||||
Sbjct 308 CGACGTGCACATCTACGACAACCACG 333
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500439815769920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |