Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq13 134 1e-26 seq6689 105 7e-18 >seq13 Length=283376 Score = 134 bits (148), Expect = 1e-26 Identities = 379/578 (66%), Gaps = 32/578 (6%) Strand=Plus/Plus Query 142243 TTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAGAAG 142302 ||||| | ||| | || ||| | || || || ||||| || || || | |||||| Sbjct 138425 TTCGGCCGCCAGCTCCGCTTCGACCTCGCGCAGGGCTTCCCGCTCATCACGACGAAGCGC 138484 Query 142303 CTGCATCTGAAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAACATC 142362 |||| || ||||| || | ||| || ||||||||||| ||||| ||||| | Sbjct 138485 GTGCACCTCAAGTCCGTCGCCTACGAGCTGCTGTGGTTCCTGCGCGGCGACTCGAACGTG 138544 Query 142363 AAGTATCTTCACGATCACAACGTCAAGATCTGGGATGAATGGGCTGATGCCAATGGCAAC 142422 | || || || | | ||| |||||||| || ||||| || ||| | ||| | Sbjct 138545 CGCTGGCTCCAGGAGCGCGGCGTGCGCATCTGGGACGAGTGGGCCGACGCCGACGGCGAG 138604 Query 142423 CTCGGACCTGTCTACGGCAAGCAGTGGATGTCCTGGACGAACCTCGTTGTCGCTGGAGAT 142482 ||||| || ||||||||| |||||| || ||| ||| ||| ||| Sbjct 138605 CTCGGCCCCGTCTACGGCGTCCAGTGGCGCTCGTGGCCGA----------CGCCGGACG- 138653 Query 142483 GACGTCACAGACGAACCGATCGATCAG---ATCCGCCGGATCATTACTGACTTGAAGAAG 142539 | || ||| | ||| | | ||| ||| ||| | ||||| | || Sbjct 138654 GCCGCCAC-GTCGACCAGGTCGCGCAGGTGATCGAGCAGATCAGGGCGAAC--------- 138703 Query 142540 TCTCCTCATTCTCGTCGTCACATCGTCACCGCGTGGAACCCTGCTGAAGTCGACGACATG 142599 || | || || || ||||||||| ||||||||||| | || |||| |||||| Sbjct 138704 ---CCCGACTCGCGACGGCACATCGTCTCCGCGTGGAACGTCGGGGAGATCGAGGACATG 138760 Query 142600 GCACTTCCTCCGTGTCACATGATGTTCCAATTCCACGTCGACTCGAAGAAGCGTCTGTCA 142659 || || || ||||| ||| | | ||||| ||| |||| | | || | || || || Sbjct 138761 GCGCTGCCGCCGTGCCACGCGTTCTTCCAGTTCTACGTGGCC--GACGGC-CGGCTCTCG 138817 Query 142660 TGCCAGCTGTATCAGCGTTCGGCAGACTGGTTCCTCGGCGTTCCGTTCAACATTGCTTCG 142719 |||||||| || ||||| ||||| ||| |||||||| || ||||||||||| || ||| Sbjct 138818 TGCCAGCTCTACCAGCGCTCGGCGGACCTCTTCCTCGGGGTGCCGTTCAACATCGCGTCG 138877 Query 142720 TACGCGCTTCTCACACAGCTCATTGCTCGCG-AATGCGGTCTGGAACTCGGAGACTTCGT 142778 |||||||| ||| || | | || |||| | ||| || || |||| |||||||| Sbjct 138878 TACGCGCTGCTCGTCCACATGGTCGC-CGCGCAGACCGGCCTCGAGGTCGGCGACTTCGT 138936 Query 142779 CCACACCTTCGGCAATTCGCACATCTACGATACACACG 142816 ||| ||| | |||||||||||| | |||| Sbjct 138937 GTGGACCGGAGGCGACGTGCACATCTACGACAACCACG 138974 >seq6689 Length=433 Score = 105 bits (116), Expect = 7e-18 Identities = 186/266 (70%), Gaps = 5/266 (2%) Strand=Plus/Plus Query 142552 CGTCGTCACATCGTCACCGCGTGGAACCCTGCTGAAGTCGACGACATGGCACTTCCTCCG 142611 || || ||||||||| ||| |||| || | || |||| |||||||| || || ||| Sbjct 72 CGACGGCACATCGTCGCCGGGTGGGACGTCGGGGAGATCGAGGACATGGCGCTGCCGCCG 131 Query 142612 TGTCACATGATGTTCCAATTCCACGTCGACTCGAAGAAGCGTCTGTCATGCCAGCTGTAT 142671 || | | | | ||||| ||| ||| | | || | || || || |||||||| || Sbjct 132 TGCCGCGCGTTCTTCCAGTTCTACGGGGCC--GACGGC-CGGCTCTCGTGCCAGCTCTAC 188 Query 142672 CAGCGTTCGGCAGACTGGTTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGCTTCTC 142731 ||||| ||||| ||| |||||||| || ||||||||||| || ||||||||||| ||| Sbjct 189 CAGCGCTCGGCGGACCTCTTCCTCGGGGTGCCGTTCAACATCGCGTCGTACGCGCTGCTC 248 Query 142732 ACACAGCTCATTG-CTCGCGAATGCGGTCTGGAACTCGGAGACTTCGTCCACACCTTCGG 142790 || | | | ||||| | ||| || || |||| |||||||| ||| || Sbjct 249 GTCCACATGGTCGCCTCGC-AGACCGGCCTCGAGGTCGGCGACTTCGTGTGGACCGGAGG 307 Query 142791 CAATTCGCACATCTACGATACACACG 142816 | | |||||||||||| | |||| Sbjct 308 CGACGTGCACATCTACGACAACCACG 333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500439815769920