Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq13 167 3e-36 seq6689 147 3e-30 >seq13 Length=283376 Score = 167 bits (184), Expect = 3e-36 Identities = 229/320 (72%), Gaps = 0/320 (0%) Strand=Plus/Minus Query 146924 GCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCT 146983 |||| ||||||||| ||||| |||| |||| || ||| ||| ||||| || || Sbjct 138980 GCTCGACGTGGTTGTCGTAGATGTGCACGTCGCCTCCGGTCCACACGAAGTCGCCGACCT 138921 Query 146984 TAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGG 147043 ||||||||| ||| ||||||| | |||||||| ||| || |||||||| | Sbjct 138920 CGAGGCCGGTCTGCGCGGCGACCATGTGGACGAGCAGCGCGTACGACGCGATGTTGAACG 138861 Query 147044 GGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGG 147103 | ||||| ||| | |||| |||| | |||||| ||||||||||||||| ||||||| Sbjct 138860 GCACCCCGAGGAAGAGGTCCGCCGAGCGCTGGTAGAGCTGGCACGAGAGCCGGCCGTCGG 138801 Query 147104 CCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGG 147163 ||||||| |||||| | | |||||||||||||||||||||| | | ||| || Sbjct 138800 CCACGTAGAACTGGAAGAACGCGTGGCACGGCGGCAGCGCCATGTCCTCGATCTCCCCGA 138741 Query 147164 GGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAA 147223 |||||| || ||||| | |||| | ||||||||| | | |||| ||||| | Sbjct 138740 CGTTCCACGCGGAGACGATGTGCCGTCGCGAGTCGGGGTTCGCCCTGATCTGCTCGATCA 138681 Query 147224 CCCACCTCAGCTGGTCCACG 147243 || | | |||||| ||| Sbjct 138680 CCTGCGCGACCTGGTCGACG 138661 >seq6689 Length=433 Score = 147 bits (162), Expect = 3e-30 Identities = 167/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 146924 GCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCT 146983 |||| ||||||||| ||||| |||| |||| || ||| ||| ||||| || || Sbjct 339 GCTCGACGTGGTTGTCGTAGATGTGCACGTCGCCTCCGGTCCACACGAAGTCGCCGACCT 280 Query 146984 TAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGG 147043 ||||||||| ||| ||||||| | |||||||| ||| || |||||||| | Sbjct 279 CGAGGCCGGTCTGCGAGGCGACCATGTGGACGAGCAGCGCGTACGACGCGATGTTGAACG 220 Query 147044 GGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGG 147103 | ||||| ||| | |||| |||| | |||||| ||||||||||||||| ||||||| Sbjct 219 GCACCCCGAGGAAGAGGTCCGCCGAGCGCTGGTAGAGCTGGCACGAGAGCCGGCCGTCGG 160 Query 147104 CCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATG 147147 || |||| |||||| | | | |||||||||||||||||||| Sbjct 159 CCCCGTAGAACTGGAAGAACGCGCGGCACGGCGGCAGCGCCATG 116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583418769148800