Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq9491 129 8e-24 seq9384 87.8 3e-11 seq13 87.8 3e-11 seq12 86.0 9e-11 >seq9491 Length=867449 Score = 129 bits (142), Expect = 8e-24 Identities = 288/423 (68%), Gaps = 12/423 (3%) Strand=Plus/Plus Query 165450 GTCGTCGTCGGTCCGTGTTCGGCACACGACCCGGACGCCGTTGTCGAGTATGGTCGGCGG 165509 ||| ||||||| || || |||| |||||||| || |||| ||||||| | |||| Sbjct 782285 GTCATCGTCGGCCCCTGCTCGGTGCACGACCCCGAGGCCGCGCTCGAGTACGCGGGGCGC 782344 Query 165510 TTGCGCGCCCTCGTACGGGCCGAGGTCGACGACGCCCTTTGTGTGGTCATGCGCGCCTAT 165569 || |||| ||| | |||| ||| |||| ||| || |||||||||| ||| Sbjct 782345 CTGGCCGCCGTCGCGCA---CGAGCTCGCGGACGACCTCATGGTCGTCATGCGCGTCTAC 782401 Query 165570 GTCGAAAAGCCGCGCACGACCGTTGGATGGAAGGGCCTGGCCAGTGACCCCGATCTTGAT 165629 |||| ||||||||||||||||| || ||||||||||| || ||||| | || || Sbjct 782402 TTCGAGAAGCCGCGCACGACCGTGGGCTGGAAGGGCCTCATCAACGACCCGCACCTCGAC 782461 Query 165630 GGCTCGTGCCGCCTGGCTGATGGCCTTGATACATCGCGCCGCCTGCTGCGTGATC-TCGT 165688 || ||| | | || | ||||| | ||||| ||| | ||| || || ||| Sbjct 782462 GGGTCGCACGACGTGCACCACGGCCT--GCGCCTCGCG-CGCGAGGTGC-TGCTCGGCGT 782517 Query 165689 CGTCGACGTCGACCAACCCGTGGCCGTCGAGTTTCTC-AGTCCTCTGGTGGCC-CCCTAT 165746 | |||||| || | || | || |||||| ||| || | | | | || | || Sbjct 782518 CCTCGACGCCGGCGTCCCGGCCGCGTGCGAGTTCCTCGAGCCGAC--GAGCCCGCAGTAC 782575 Query 165747 TTGGCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCAC 165806 | || ||| || |||||||||| |||| ||||||| | ||||| ||||||||| Sbjct 782576 ATCGCCGACGCCGTGTCGTGGGGCGCGATCGGCGCGCGCAACGCCGAGTCGCAGGTGCAC 782635 Query 165807 CGCGAGATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCAGC 165866 ||| || | || |||| ||| | ||||| | || ||||| ||| ||||||||| | Sbjct 782636 CGCCAGCTCGCCTCGGGCCTGTCCATGCCCGTCGGGTTCAAGAACGCGACCGACGGCGAC 782695 Query 165867 GTG 165869 ||| Sbjct 782696 GTG 782698 >seq9384 Length=412 Score = 87.8 bits (96), Expect = 3e-11 Identities = 129/182 (71%), Gaps = 3/182 (2%) Strand=Plus/Minus Query 165454 TCGTCGGTCCGTGTTCGGCACACGACCCGGACGCCGTTGTCGAGTATGGTCGGCGGTTGC 165513 ||||||| || || ||| |||||||| | |||| ||||||| | |||| || Sbjct 393 TCGTCGGCCCCTGCGCGGTGCACGACCCCGCGGCCGCGCTCGAGTACGCGGGGCGCCTGG 334 Query 165514 GCGCCCTCGTACGGGCCGAGGTCGACGACGCCCTTTGTGTGGTCATGCGCGCCTATGTCG 165573 |||| ||| | |||| ||| |||| ||| || |||||||||| ||| ||| Sbjct 333 ACGCCGTCGCGCA---CGAGCTCGCGGACGACCTCATGGTCGTCATGCGCGTCTACTTCG 277 Query 165574 AAAAGCCGCGCACGACCGTTGGATGGAAGGGCCTGGCCAGTGACCCCGATCTTGATGGCT 165633 | ||||||||||||||||| || ||||||||||| || ||||| | || || || | Sbjct 276 AGAAGCCGCGCACGACCGTGGGCTGGAAGGGCCTCATCATCGACCCGCACCTCGACGGGT 217 Query 165634 CG 165635 || Sbjct 216 CG 215 >seq13 Length=283376 Score = 87.8 bits (96), Expect = 3e-11 Identities = 187/277 (68%), Gaps = 12/277 (4%) Strand=Plus/Plus Query 2133593 CTCCATGTGCGAGCACCACCTGCTGCCCTTTATCGGCAAGGCCCACGTGGGCTACCTGCC 2133652 ||| | ||||||||||||||| ||||||| |||| || ||||| || ||| | || Sbjct 15056 CTCGACGTGCGAGCACCACCTCGTGCCCTTCCACGGCGTCGCGCACGTCGGGTACATCCC 15115 Query 2133653 CG-CGGGCAAG-----ATCATCGGTCTGAGCAAGATCCCGCGCATCGTCGACATGTTTTC 2133706 | || | | | |||| || ||| ||| || ||||| ||||||| ||| | Sbjct 15116 CAACGTGGACGGCCGCATCACGGGCCTGTCGAAGCTCGCGCGCCTCGTCGAGGTGTACGC 15175 Query 2133707 CGACCGCTTCCAAGTACAGGAGGCACTCACGCGCCAGATCGCCGA---GAGCGTGAGCCA 2133763 |||| || || |||||| |||||| ||| |||| || | |||| || Sbjct 15176 GCGCCGCCCGCAGGTGCAGGAGCGGCTCACGTCGCAGGTCGCGGACGCGCTCGTGGAGCA 15235 Query 2133764 GGTTACGGGCGCGCGCGGCGTCGGCGTCGTCCTCGAGGGCCTGCACATGTGCGTGTGTAT 2133823 | | | ||||||||| ||||||| ||||| || |||| ||||| ||| || Sbjct 15236 CCTCAAGC---CGCGCGGCGCGATCGTCGTCGTCGAGTGCGAGCACCTGTGCATGTCGAT 15292 Query 2133824 GCGCGGCGTGCGCAAAACGGGCTCGAACACGGTCACG 2133860 ||||||||||||||| | ||| || ||| |||||| Sbjct 15293 GCGCGGCGTGCGCAAGCCCGGCGCGCGCACCGTCACG 15329 >seq12 Length=290010 Score = 86.0 bits (94), Expect = 9e-11 Identities = 173/257 (67%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 ||||| || ||||||||||| ||||| | || || | || || || || ||| | | | Sbjct 208123 CCCACACTATTTAATGCCGGTACGCCACATCCTCAAATGTCTTCTTGTTTCCTGATTGCC 208064 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| ||| || || || || || || ||||| | || |||| || | || ||| Sbjct 208063 ATGAAGGACGACTCCATTGAAGGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCC 208004 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104 ||| | || || || | ||| || |||| | || || | ||| | || | Sbjct 208003 AAGACTGCAGGTGGTGTTGGTCTTCATATCAACAATATTCGTTCCACAGGCTCTTATATT 207944 Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164 || || |||||||| || ||||| | | |||||| | || || || ||| |||| Sbjct 207943 GCAGGTACCAACGGTACTTCAAACGGGTTGATTCCCATGATCCGTGTCTTCAACAACACT 207884 Query 260165 GCGCGCTACGTCGACCA 260181 || || ||||| ||||| Sbjct 207883 GCACGTTACGTGGACCA 207867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176895679153704