Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq9491 129 8e-24
seq9384 87.8 3e-11
seq13 87.8 3e-11
seq12 86.0 9e-11
>seq9491
Length=867449
Score = 129 bits (142), Expect = 8e-24
Identities = 288/423 (68%), Gaps = 12/423 (3%)
Strand=Plus/Plus
Query 165450 GTCGTCGTCGGTCCGTGTTCGGCACACGACCCGGACGCCGTTGTCGAGTATGGTCGGCGG 165509
||| ||||||| || || |||| |||||||| || |||| ||||||| | ||||
Sbjct 782285 GTCATCGTCGGCCCCTGCTCGGTGCACGACCCCGAGGCCGCGCTCGAGTACGCGGGGCGC 782344
Query 165510 TTGCGCGCCCTCGTACGGGCCGAGGTCGACGACGCCCTTTGTGTGGTCATGCGCGCCTAT 165569
|| |||| ||| | |||| ||| |||| ||| || |||||||||| |||
Sbjct 782345 CTGGCCGCCGTCGCGCA---CGAGCTCGCGGACGACCTCATGGTCGTCATGCGCGTCTAC 782401
Query 165570 GTCGAAAAGCCGCGCACGACCGTTGGATGGAAGGGCCTGGCCAGTGACCCCGATCTTGAT 165629
|||| ||||||||||||||||| || ||||||||||| || ||||| | || ||
Sbjct 782402 TTCGAGAAGCCGCGCACGACCGTGGGCTGGAAGGGCCTCATCAACGACCCGCACCTCGAC 782461
Query 165630 GGCTCGTGCCGCCTGGCTGATGGCCTTGATACATCGCGCCGCCTGCTGCGTGATC-TCGT 165688
|| ||| | | || | ||||| | ||||| ||| | ||| || || |||
Sbjct 782462 GGGTCGCACGACGTGCACCACGGCCT--GCGCCTCGCG-CGCGAGGTGC-TGCTCGGCGT 782517
Query 165689 CGTCGACGTCGACCAACCCGTGGCCGTCGAGTTTCTC-AGTCCTCTGGTGGCC-CCCTAT 165746
| |||||| || | || | || |||||| ||| || | | | | || | ||
Sbjct 782518 CCTCGACGCCGGCGTCCCGGCCGCGTGCGAGTTCCTCGAGCCGAC--GAGCCCGCAGTAC 782575
Query 165747 TTGGCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCAC 165806
| || ||| || |||||||||| |||| ||||||| | ||||| |||||||||
Sbjct 782576 ATCGCCGACGCCGTGTCGTGGGGCGCGATCGGCGCGCGCAACGCCGAGTCGCAGGTGCAC 782635
Query 165807 CGCGAGATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCAGC 165866
||| || | || |||| ||| | ||||| | || ||||| ||| ||||||||| |
Sbjct 782636 CGCCAGCTCGCCTCGGGCCTGTCCATGCCCGTCGGGTTCAAGAACGCGACCGACGGCGAC 782695
Query 165867 GTG 165869
|||
Sbjct 782696 GTG 782698
>seq9384
Length=412
Score = 87.8 bits (96), Expect = 3e-11
Identities = 129/182 (71%), Gaps = 3/182 (2%)
Strand=Plus/Minus
Query 165454 TCGTCGGTCCGTGTTCGGCACACGACCCGGACGCCGTTGTCGAGTATGGTCGGCGGTTGC 165513
||||||| || || ||| |||||||| | |||| ||||||| | |||| ||
Sbjct 393 TCGTCGGCCCCTGCGCGGTGCACGACCCCGCGGCCGCGCTCGAGTACGCGGGGCGCCTGG 334
Query 165514 GCGCCCTCGTACGGGCCGAGGTCGACGACGCCCTTTGTGTGGTCATGCGCGCCTATGTCG 165573
|||| ||| | |||| ||| |||| ||| || |||||||||| ||| |||
Sbjct 333 ACGCCGTCGCGCA---CGAGCTCGCGGACGACCTCATGGTCGTCATGCGCGTCTACTTCG 277
Query 165574 AAAAGCCGCGCACGACCGTTGGATGGAAGGGCCTGGCCAGTGACCCCGATCTTGATGGCT 165633
| ||||||||||||||||| || ||||||||||| || ||||| | || || || |
Sbjct 276 AGAAGCCGCGCACGACCGTGGGCTGGAAGGGCCTCATCATCGACCCGCACCTCGACGGGT 217
Query 165634 CG 165635
||
Sbjct 216 CG 215
>seq13
Length=283376
Score = 87.8 bits (96), Expect = 3e-11
Identities = 187/277 (68%), Gaps = 12/277 (4%)
Strand=Plus/Plus
Query 2133593 CTCCATGTGCGAGCACCACCTGCTGCCCTTTATCGGCAAGGCCCACGTGGGCTACCTGCC 2133652
||| | ||||||||||||||| ||||||| |||| || ||||| || ||| | ||
Sbjct 15056 CTCGACGTGCGAGCACCACCTCGTGCCCTTCCACGGCGTCGCGCACGTCGGGTACATCCC 15115
Query 2133653 CG-CGGGCAAG-----ATCATCGGTCTGAGCAAGATCCCGCGCATCGTCGACATGTTTTC 2133706
| || | | | |||| || ||| ||| || ||||| ||||||| ||| |
Sbjct 15116 CAACGTGGACGGCCGCATCACGGGCCTGTCGAAGCTCGCGCGCCTCGTCGAGGTGTACGC 15175
Query 2133707 CGACCGCTTCCAAGTACAGGAGGCACTCACGCGCCAGATCGCCGA---GAGCGTGAGCCA 2133763
|||| || || |||||| |||||| ||| |||| || | |||| ||
Sbjct 15176 GCGCCGCCCGCAGGTGCAGGAGCGGCTCACGTCGCAGGTCGCGGACGCGCTCGTGGAGCA 15235
Query 2133764 GGTTACGGGCGCGCGCGGCGTCGGCGTCGTCCTCGAGGGCCTGCACATGTGCGTGTGTAT 2133823
| | | ||||||||| ||||||| ||||| || |||| ||||| ||| ||
Sbjct 15236 CCTCAAGC---CGCGCGGCGCGATCGTCGTCGTCGAGTGCGAGCACCTGTGCATGTCGAT 15292
Query 2133824 GCGCGGCGTGCGCAAAACGGGCTCGAACACGGTCACG 2133860
||||||||||||||| | ||| || ||| ||||||
Sbjct 15293 GCGCGGCGTGCGCAAGCCCGGCGCGCGCACCGTCACG 15329
>seq12
Length=290010
Score = 86.0 bits (94), Expect = 9e-11
Identities = 173/257 (67%), Gaps = 0/257 (0%)
Strand=Plus/Minus
Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984
||||| || ||||||||||| ||||| | || || | || || || || ||| | | |
Sbjct 208123 CCCACACTATTTAATGCCGGTACGCCACATCCTCAAATGTCTTCTTGTTTCCTGATTGCC 208064
Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044
||||||| ||| || || || || || || ||||| | || |||| || | || |||
Sbjct 208063 ATGAAGGACGACTCCATTGAAGGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCC 208004
Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104
||| | || || || | ||| || |||| | || || | ||| | || |
Sbjct 208003 AAGACTGCAGGTGGTGTTGGTCTTCATATCAACAATATTCGTTCCACAGGCTCTTATATT 207944
Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164
|| || |||||||| || ||||| | | |||||| | || || || ||| ||||
Sbjct 207943 GCAGGTACCAACGGTACTTCAAACGGGTTGATTCCCATGATCCGTGTCTTCAACAACACT 207884
Query 260165 GCGCGCTACGTCGACCA 260181
|| || ||||| |||||
Sbjct 207883 GCACGTTACGTGGACCA 207867
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7176895679153704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |