Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_026584.1
Length=109871
Score E
Sequences producing significant alignments: (Bits) Value
seq17 143 2e-29
seq9489 134 1e-26
>seq17
Length=237104
Score = 143 bits (158), Expect = 2e-29
Identities = 211/298 (71%), Gaps = 3/298 (1%)
Strand=Plus/Minus
Query 97544 CGCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTC 97603
||| |||| ||||||||| | |||| ||| || ||||||| ||| || ||| ||
Sbjct 111820 CGCGCCCATGGGCAGGAACAGGGCGTCGCCCTGGCCGATGAGCTTCTCCGCGCCGGGCTG 111761
Query 97604 GTCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCAC 97663
||| || | || || || | ||| || | || ||||||| ||||| ||||||||
Sbjct 111760 GTCGAGCACGACGCGCGAGTCCGCGAGGGACGACGTCGCGAACGCGAGCCGCGACGGCAC 111701
Query 97664 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 97723
||| | ||||| ||||| || || || || || || || ||||||||||| || || ||
Sbjct 111700 GTTCGCCTTGATGAGGCCCGTCACGACGTCGACCGACGGGCGCTGCGTCGCGAGCACCAG 111641
Query 97724 ATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTT 97783
|| || || || |||||||| ||| | |||||| || ||||||||| ||
Sbjct 111640 GTGGATGCCCGCCGCGCGCGCGAGCTGCGTGATGCGCTGGATCGAGGCCTCGACGTCGCG 111581
Query 97784 CTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGG 97841
| | || ||||||||||||| ||||| |||||||| || |||| | ||| |||
Sbjct 111580 C---GGGGCGACCATCATGAGGTCGGCGAGCTCGTCGACGACGACCAGCAGGTACGGG 111526
>seq9489
Length=379987
Score = 134 bits (148), Expect = 1e-26
Identities = 233/335 (70%), Gaps = 4/335 (1%)
Strand=Plus/Minus
Query 99906 CAGGTAGTAGGGTTTGTCGAGCAGGATCGGGTCGACCTCCCCGGCCGGCACGAACTCCAC 99965
|||||||||| ||||||||||| |||||||| || | || |||||||||||||||
Sbjct 200934 CAGGTAGTAGCTGCGGTCGAGCAGGAGCGGGTCGATCTGCTCGCTCGGCACGAACTCCAC 200875
Query 99966 GACGTCAATCACCTTGTTGGTTTCGCTGGGCAGTTCTGCCAAGTCCTCATTGGTCAGTAG 100025
||| || ||| | | || ||| ||| || | || |||||||| | ||||| |
Sbjct 200874 GACCTCGATCTCACGGCTGCGCTCGGCGGGGAGCGCGGCGAAGTCCTCGCTCGTCAGCAC 200815
Query 100026 GGCGGTTTGCCCGTCGACCTCGAACACCTTGCCCAGATCGGC-CGTGTGG-ACCTGCTCC 100083
| |||| || || || | ||| || ||||| | ||| || ||| || || |||
Sbjct 200814 GACGGTGCGCTCGCCGTCGTCGTACGCCTTGTC--GATGTGCTCGTACGGCACGACCTCG 200757
Query 100084 CCACACGTCTCACAGACCTTGTGGTAGCGAATCCGCCCGCCGTCCTGGACGTGCGCCAGA 100143
|| |||| || || ||||||| || || |||||||||| | |||| || |
Sbjct 200756 CCGTCGATCTCGCACACGCGCCGGTAGCGGATGCGGCCGCCGTCCTTGTCGTGGACCTGG 200697
Query 100144 TGGCCCTTCAGGTCGTGTTCCTCGGTGGCCGCGTACATCTTCACCGGCACGTTGACCAAC 100203
|| | || |||||| ||||| || || | ||||| ||| |||||||||||||| |
Sbjct 200696 TGCAGCGGCACGTCGTGGTCCTCCGTCGCGGAGTACACCTTGACCGGCACGTTGACGAGG 200637
Query 100204 CCGAAGTTGACCGCGCCTGTCCAAACTGCTCTCAT 100238
||||| ||| ||||| |||| | || |||||
Sbjct 200636 CCGAACGTGATGGCGCCCTTCCAGATGGCCCTCAT 200602
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 351421741511584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |