Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_026584.1 Length=109871 Score E Sequences producing significant alignments: (Bits) Value seq17 143 2e-29 seq9489 134 1e-26 >seq17 Length=237104 Score = 143 bits (158), Expect = 2e-29 Identities = 211/298 (71%), Gaps = 3/298 (1%) Strand=Plus/Minus Query 97544 CGCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTC 97603 ||| |||| ||||||||| | |||| ||| || ||||||| ||| || ||| || Sbjct 111820 CGCGCCCATGGGCAGGAACAGGGCGTCGCCCTGGCCGATGAGCTTCTCCGCGCCGGGCTG 111761 Query 97604 GTCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCAC 97663 ||| || | || || || | ||| || | || ||||||| ||||| |||||||| Sbjct 111760 GTCGAGCACGACGCGCGAGTCCGCGAGGGACGACGTCGCGAACGCGAGCCGCGACGGCAC 111701 Query 97664 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 97723 ||| | ||||| ||||| || || || || || || || ||||||||||| || || || Sbjct 111700 GTTCGCCTTGATGAGGCCCGTCACGACGTCGACCGACGGGCGCTGCGTCGCGAGCACCAG 111641 Query 97724 ATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTT 97783 || || || || |||||||| ||| | |||||| || ||||||||| || Sbjct 111640 GTGGATGCCCGCCGCGCGCGCGAGCTGCGTGATGCGCTGGATCGAGGCCTCGACGTCGCG 111581 Query 97784 CTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGG 97841 | | || ||||||||||||| ||||| |||||||| || |||| | ||| ||| Sbjct 111580 C---GGGGCGACCATCATGAGGTCGGCGAGCTCGTCGACGACGACCAGCAGGTACGGG 111526 >seq9489 Length=379987 Score = 134 bits (148), Expect = 1e-26 Identities = 233/335 (70%), Gaps = 4/335 (1%) Strand=Plus/Minus Query 99906 CAGGTAGTAGGGTTTGTCGAGCAGGATCGGGTCGACCTCCCCGGCCGGCACGAACTCCAC 99965 |||||||||| ||||||||||| |||||||| || | || ||||||||||||||| Sbjct 200934 CAGGTAGTAGCTGCGGTCGAGCAGGAGCGGGTCGATCTGCTCGCTCGGCACGAACTCCAC 200875 Query 99966 GACGTCAATCACCTTGTTGGTTTCGCTGGGCAGTTCTGCCAAGTCCTCATTGGTCAGTAG 100025 ||| || ||| | | || ||| ||| || | || |||||||| | ||||| | Sbjct 200874 GACCTCGATCTCACGGCTGCGCTCGGCGGGGAGCGCGGCGAAGTCCTCGCTCGTCAGCAC 200815 Query 100026 GGCGGTTTGCCCGTCGACCTCGAACACCTTGCCCAGATCGGC-CGTGTGG-ACCTGCTCC 100083 | |||| || || || | ||| || ||||| | ||| || ||| || || ||| Sbjct 200814 GACGGTGCGCTCGCCGTCGTCGTACGCCTTGTC--GATGTGCTCGTACGGCACGACCTCG 200757 Query 100084 CCACACGTCTCACAGACCTTGTGGTAGCGAATCCGCCCGCCGTCCTGGACGTGCGCCAGA 100143 || |||| || || ||||||| || || |||||||||| | |||| || | Sbjct 200756 CCGTCGATCTCGCACACGCGCCGGTAGCGGATGCGGCCGCCGTCCTTGTCGTGGACCTGG 200697 Query 100144 TGGCCCTTCAGGTCGTGTTCCTCGGTGGCCGCGTACATCTTCACCGGCACGTTGACCAAC 100203 || | || |||||| ||||| || || | ||||| ||| |||||||||||||| | Sbjct 200696 TGCAGCGGCACGTCGTGGTCCTCCGTCGCGGAGTACACCTTGACCGGCACGTTGACGAGG 200637 Query 100204 CCGAAGTTGACCGCGCCTGTCCAAACTGCTCTCAT 100238 ||||| ||| ||||| |||| | || ||||| Sbjct 200636 CCGAACGTGATGGCGCCCTTCCAGATGGCCCTCAT 200602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351421741511584