Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_027402.1 Length=240413 Score E Sequences producing significant alignments: (Bits) Value seq13 96.9 5e-15 seq6689 91.5 2e-13 >seq13 Length=283376 Score = 96.9 bits (106), Expect = 5e-15 Identities = 150/212 (71%), Gaps = 7/212 (3%) Strand=Plus/Plus Query 198329 CTTTCATGTCAGCTCTATCAACGCAGTGCGGATTTTTTCCTCGGCGTGCCGTTCAACATC 198388 || || || |||||||| || ||| ||||| | |||||||| ||||||||||||||| Sbjct 138812 CTCTCGTGCCAGCTCTACCAGCGCTCGGCGGACCTCTTCCTCGGGGTGCCGTTCAACATC 138871 Query 198389 GCGTCTTACGCATTACTCGTGCACATGGTTGCCCAGCAGGTTAACATGGTGCCGGGCGAT 198448 ||||| ||||| | ||||| |||||||| ||| |||| | | | | ||||| Sbjct 138872 GCGTCGTACGCGCTGCTCGTCCACATGGTCGCCGCGCAGACCGGCCTCGAGGTCGGCGAC 138931 Query 198449 TTCATTTGGACGGGCGGTGACACACATCTCTACTCTAATCATCTGGAGCAGG---CCAAG 198505 ||| | ||||| || || ||| || ||||| || || | ||||||| | || Sbjct 138932 TTCGTGTGGACCGGAGGCGACGTGCACATCTACGACAACCACGTCGAGCAGGTGCGCGAG 138991 Query 198506 CTCCAGCTGACGCGTGAGCCGTTACCTTTACC 198537 ||||| ||||| |||||| |||| |||| Sbjct 138992 ---CAGCTCACGCGCGAGCCG-TACCCGTACC 139019 >seq6689 Length=433 Score = 91.5 bits (100), Expect = 2e-13 Identities = 149/212 (70%), Gaps = 7/212 (3%) Strand=Plus/Plus Query 198329 CTTTCATGTCAGCTCTATCAACGCAGTGCGGATTTTTTCCTCGGCGTGCCGTTCAACATC 198388 || || || |||||||| || ||| ||||| | |||||||| ||||||||||||||| Sbjct 171 CTCTCGTGCCAGCTCTACCAGCGCTCGGCGGACCTCTTCCTCGGGGTGCCGTTCAACATC 230 Query 198389 GCGTCTTACGCATTACTCGTGCACATGGTTGCCCAGCAGGTTAACATGGTGCCGGGCGAT 198448 ||||| ||||| | ||||| |||||||| ||| |||| | | | | ||||| Sbjct 231 GCGTCGTACGCGCTGCTCGTCCACATGGTCGCCTCGCAGACCGGCCTCGAGGTCGGCGAC 290 Query 198449 TTCATTTGGACGGGCGGTGACACACATCTCTACTCTAATCATCTGGAGCAGG---CCAAG 198505 ||| | ||||| || || ||| || ||||| || || | ||||||| | || Sbjct 291 TTCGTGTGGACCGGAGGCGACGTGCACATCTACGACAACCACGTCGAGCAGGTGCGCGAG 350 Query 198506 CTCCAGCTGACGCGTGAGCCGTTACCTTTACC 198537 ||||| ||| | |||||| |||| |||| Sbjct 351 ---CAGCTCACGGGCGAGCCG-TACCCGTACC 378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 769102335179360