Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq44 145 6e-30
seq80 134 1e-26
seq170 102 6e-17
>seq44
Length=117725
Score = 145 bits (160), Expect = 6e-30
Identities = 376/567 (66%), Gaps = 16/567 (3%)
Strand=Plus/Plus
Query 19360 TATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTACA 19419
|| || || || ||| ||| |||||||||||||| ||| || | ||| | | || | |
Sbjct 80272 TACGGTCCTCCAGGTACTGGTAAAACATTAATTGCAAGAAAAATCGGTACAATGCTGA-A 80330
Query 19420 AAACAACCTCCCAAA-ATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATC 19478
||| ||||| ||||| || ||||||||| | |||| ||| ||||| ||| ||
Sbjct 80331 CGCCAAAGAGCCAAAGATTGTTAACGGTCCTGAAGTTTTAAGTAAGTATGTTGGTTCCTC 80390
Query 19479 GGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG 19538
|||||||| | || ||| || ||||| |||| |||| | || | |||| |
Sbjct 80391 AGAAGAAAACATCCGTAATTTATTCAAAGACGCAGAAGCAGAATACAAG-GCCAAGGGGG 80449
Query 19539 CAAAAG-TTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAG 19597
|| ||| || || || || || | |||||| |||| | | | ||||| ||||
Sbjct 80450 ATGAATCTTCCTTACATATCATCATTTTTGATGAACTGGATTCTGTTTTCAAGCAGAGAG 80509
Query 19598 GTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAAT 19651
|||| || || | ||| ||| ||||| ||| || |||||| | ||| | |||
Sbjct 80510 GTTCAAGAGGTGATGGTACTGGTGTAGGTGACAATGTAGTTAATCAATTGCTGGCTAAAA 80569
Query 19652 TAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAAT 19711
| ||||||||| | |||||||||||||| || || ||||| ||||| || | || |
Sbjct 80570 TGGACGGTGTTGATCAACTGAATAATATATTGGTCATTGGTATGACCAACCGTAAAGATT 80629
Query 19712 TAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTAC 19771
| || || | || | ||||| || ||| | || ||| | || | |||||| | ||||
Sbjct 80630 TGATCGATATTGCTCTTTTACGTCCAGGTAGATTCGAAGTTCAGGTTGAAATTCATTTAC 80689
Query 19772 CCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAATA 19831
| || ||| || | || | ||||| | || || ||| || ||| || |||| |
Sbjct 80690 CGGACGAAAAAGGTAGACTGCAGATTTTTGAAATTCAGACAAAAAAAATGAGAGAAAACA 80749
Query 19832 ACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCT---ACCAAAAACTATA 19888
| | | | |||||||| | | | || | ||||||| || || || | |
Sbjct 80750 ATATGATGAGCGACGATGTTAACTTGGCTGAGTT---AGCGGCTTTAACTAACAATTTTT 80806
Query 19889 GCGGCGCAGAACTTGAGGGATTAGTGA 19915
||| || ||| |||| || |||||||
Sbjct 80807 CCGGTGCTGAAATTGAAGGTTTAGTGA 80833
>seq80
Length=81108
Score = 134 bits (148), Expect = 1e-26
Identities = 447/690 (65%), Gaps = 34/690 (5%)
Strand=Plus/Minus
Query 19246 GGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGT--GTCGCGTGTTT 19303
|| || ||| |||||||||| || |||| || | ||||| |||| |||| | |||
Sbjct 7412 GGTGGTTTGGATAAAGAGTTTACTAAAATTTTCAGAAGAGCGTTTGCAAGTCGAATCTTT 7353
Query 19304 TTTC-TGCAGATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTT-- 19360
|| | ||| | || || || |||| | |||||| || |||||| |
Sbjct 7352 CCTCCTTCAGTT---ATAGAAAAACTGGGTATTTCTCATGTTAAAGG---TTTGCTATTG 7299
Query 19361 -ATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA-- 19417
| || || || ||| ||| || || |||||||| ||| | || ||| | | || |
Sbjct 7298 TACGGTCCTCCAGGTACTGGTAAGACCTTAATTGCAAGAAAGATTGGTACAATGCTGAAT 7239
Query 19418 -CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAA 19476
| ||| | || |||||| || |||||||| ||||| || | || || || |||
Sbjct 7238 GCTAAAGAGCC---CAAAATCGTCAATGGTCCAGAAATTTTGAGCAAGTACGTTGGTTCT 7182
Query 19477 TCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAA-----AACGTT 19531
|| |||||||| | || ||| ||| || || |||| |||| | | || | |
Sbjct 7181 TCAGAAGAAAACATTCGTAATTTATTTAAGGATGCAGAAGCAGAATATAGGGCCAAGGGT 7122
Query 19532 TAGGGCGCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGC 19591
||| || ||| || || ||||| || | ||||| |||| | | | ||||
Sbjct 7121 GAGG-----AATCTTCCTTACATATTATTATTTTCGATGAGCTGGATTCTGTTTTCAAGC 7067
Query 19592 AAAGAGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGT 19645
| |||||||| || || | ||| ||| |||| ||| || |||||| | |
Sbjct 7066 AGAGAGGTTCAAGAGGTGATGGTACTGGTGTAGGGGACAATGTAGTTAATCAATTGTTAG 7007
Query 19646 CAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGAC 19705
| ||| | || |||||| | || ||||||||||||| |||||||| ||||| ||| |
Sbjct 7006 CTAAAATGGATGGTGTTGATCAGTTGAATAATATTTTGGTTATTGGTATGACCAATCGTA 6947
Query 19706 TGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTA 19765
|| ||||||||||| || | || || || ||| | || ||| | | | ||||||
Sbjct 6946 AAGATTTAATAGACAGTGCTCTTTTGCGTCCAGGTAGATTTGAAGTCCAAGTTGAAATTC 6887
Query 19766 ACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGAC 19825
| |||||||||||| ||| | | ||||||| |||| || || | ||| |
Sbjct 6886 ATTTACCCGATGAAAAAGGAAGACTCCAAATTTTCGACATTCAGACGAAGAAAATGAGGG 6827
Query 19826 AAAATAACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACT 19885
||||||| | | | |||||||| | ||| || | || || || |||||||
Sbjct 6826 AAAATAATATGATGAGCGACGATGTTAACTTAGCTGAGTTAGCTGCATTAACAAAAAACT 6767
Query 19886 ATAGCGGCGCAGAACTTGAGGGATTAGTGA 19915
|| || || ||||||| |||||||
Sbjct 6766 TCTCTGGTGCTGAGATTGAGGGTTTAGTGA 6737
>seq170
Length=39039
Score = 102 bits (112), Expect = 6e-17
Identities = 359/561 (64%), Gaps = 45/561 (8%)
Strand=Plus/Minus
Query 40829 ATATTTGTCTAGCATAGGATTACAAGATAGGGATGAAGGTGATCTTGGTCCTGTTTATGG 40888
|||||| || || || || |||||||| | | ||| ||||| || || ||||||||
Sbjct 19112 ATATTTAGATAAGATGGGGTTCAAAGATAGGAAAGTAGGAGATCTGGGGCCCGTTTATGG 19053
Query 40889 ATTTCAGTCGCGACATTTTGGAGCAAAATATGACACTATGTACTCTGAT---TATACCAA 40945
|||||| | | | |||||||| || ||||| | || || | ||| |||||
Sbjct 19052 ATTTCAATGGAGGCATTTTGGTGCTAAATACAAGAC---GTGCGATGACGACTATACTGG 18996
Query 40946 TAAAGGAATGGATCAATT---ACAGTGCGTTATAGATACGATTAAATCCGATCCC---GA 40999
|||| || |||||||| |||| ||||| ||| |||| | ||||| ||
Sbjct 18995 ACAAGGTATTGATCAATTGAAACAG---GTTATTCATAAACTTAAGACAAATCCCTACGA 18939
Query 41000 TAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACATTTGATGGCATTGCC 41059
||| || || || || | || ||||||||| | || | | ||||| |||||
Sbjct 18938 TAGAAGA---ATCATTATGAGTGCCTGGAACCCAGCTGATTTTGACAAAATGGCTTTGCC 18882
Query 41060 ACCTTGTCATTTGTTATGTCAGTTTTACGTTTG------CAATG---GTGAA-------- 41102
||| || ||| | || | ||||| || || | ||| | | |||
Sbjct 18881 ACCATGCCATATTTTTTCACAGTTCTATGTCAGTTTCCCCAAAGAAGGAGAAGGATCCGG 18822
Query 41103 ----------CTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCC 41152
|| ||||| |||||| ||| | || | || ||||| | || || ||
Sbjct 18821 TAAGCCCCGCCTTTCATGCTTATTGTACCAACGTTCTTGCGATATGGGGTTGGGAGTACC 18762
Query 41153 GTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAA 41212
||||||||| || |||||| || | || |||||||| | ||| | | | |
Sbjct 18761 GTTTAACATTGCATCATATGCTTTGTTGACTAGAATGATTGCTAAAGTTGTCGACATGGA 18702
Query 41213 ACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGCC 41272
|| ||||| || |||| || || || |||| |||| |||| | | ||||| || |
Sbjct 18701 GCCAGGTGAGTTCATTCATACTTTGGGGGATGCACATGTTTATAAAGACCACATTGATGC 18642
Query 41273 GTTAACAGAACAACTGACACGAAAACCTAGACCATTTCCAACGCTACTTATTAAACGCGC 41332
|| | ||||||| | | |||| || |||||||| || | ||| |||||| | |
Sbjct 18641 CTTGAAAGAACAAATCTCCAGAAATCCAAGACCATTCCCGAAACTAAAGATTAAAAGGGA 18582
Query 41333 TGTTGAAAACATTGATGATTT 41353
||| || |||||||||||||
Sbjct 18581 CGTTAAAGACATTGATGATTT 18561
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397410020799460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |