Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq38 293 3e-74
seq8 208 1e-48
>seq38
Length=131761
Score = 293 bits (324), Expect = 3e-74
Identities = 909/1389 (65%), Gaps = 42/1389 (3%)
Strand=Plus/Minus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766
||| || || | ||| |||||| || |||||||||| |||||| ||||| | |||||
Sbjct 126716 GTACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGA 126657
Query 110767 GGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATG-CG 110823
|| || |||||||||||||| || || | | | || ||| | || | |||| |
Sbjct 126656 TGCAGTAGGCATTGGTGCCATGGTCAAGGAATTT--CTAATACCATGCTTCATGATATCT 126599
Query 110824 TTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG 110883
|| ||| || ||||| || | || | || || |||||||| ||||||||
Sbjct 126598 TTTCTTAAGGTG-TCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTG 126540
Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC--A 110941
|| | ||||| || || ||||| || | || ||||| || | ||| | |||| |
Sbjct 126539 TAGTATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTC--CTTCTGA 126482
Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001
|| | |||||| || |||| ||| || ||||| || ||||||||||| | |||
Sbjct 126481 GCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTT 126422
Query 111002 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061
| | |||||| || |||||||||| | || ||| || || || ||||||
Sbjct 126421 AGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGA 126362
Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACG 111121
||||||||||||||| |||| ||||| |||| |||||| || |||| ||| |||||
Sbjct 126361 CCTTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACA 126302
Query 111122 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 111181
|| || |||| | |||||||||| ||||| ||| ||||||| || | ||||||
Sbjct 126301 GGGTAGTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCA 126242
Query 111182 TGAAGTTTTTCATAATCAAAAGTGCGAGTCT---------------CTTCATTGACATAC 111226
|| | ||||| | | | ||| ||||| |||| ||| || |
Sbjct 126241 TGTAATTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGC 126183
Query 111227 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 111286
||| | ||| | || ||||| || |||||||| || ||||| | ||| ||| ||
Sbjct 126182 --TGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCA 126125
Query 111287 AAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTC 111346
| |||||| |||||||| || ||| || || || || ||||| ||| ||
Sbjct 126124 ACAATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTT 126065
Query 111347 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGA 111406
|||| || ||||||||||| | | | | || || || || || || || | || | |
Sbjct 126064 CTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAA 126005
Query 111407 ATAGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 111466
|| | | ||| | || || | | || | || | || || || ||||||
Sbjct 126004 ATGGAATACCATA-ATTTTTGG--GCTTTGATAGTCTTACCACGACCTTCTTTCTCGTAG 125948
Query 111467 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTC 111525
|| || || || |||||||| ||||| ||| | ||| || || |||
Sbjct 125947 CGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGAGCTGATGT- 125889
Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585
|||| |||| | | ||| ||| ||| || || |||||||||||||| || |||||
Sbjct 125888 TGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAAT 125829
Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645
||| || | | || | |||||| ||| || || | ||| ||||| || |||
Sbjct 125828 CCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTT-CTTCCTAA 125770
Query 111646 -CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC-- 111702
|||| || || | ||||| || |||||||| || || || | || | | ||
Sbjct 125769 TATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAG 125710
Query 111703 --CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 111760
|||| | ||| | || | ||||| || || ||| || || || |||| |||
Sbjct 125709 GTCTTT-TATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATA 125651
Query 111761 GGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACA 111820
||||| | ||| | || ||| ||||| || ||| ||| | | | | |
Sbjct 125650 GGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATG 125591
Query 111821 TCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGA 111880
| |||||| || | |||||||| ||||| || || || ||||| ||| | |
Sbjct 125590 TTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAG 125531
Query 111881 GTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATC 111940
|| | || || || | ||| ||||||||||| |||| | | ||| ||| ||||||
Sbjct 125530 GTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATT 125471
Query 111941 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-G 111999
|| ||| |||| ||||| |||||||| | ||||| | |||||| | || ||| || |
Sbjct 125470 TGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGT-AAAATATTTTAG 125412
Query 112000 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGC 112059
|||||| || || || || || ||| || || ||| ||||||||||| | |||
Sbjct 125411 AGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGTGC 125352
Query 112060 GACCCGCAT 112068
||| | |||
Sbjct 125351 GACTCTCAT 125343
>seq8
Length=326064
Score = 208 bits (230), Expect = 1e-48
Identities = 890/1385 (64%), Gaps = 40/1385 (3%)
Strand=Plus/Minus
Query 110725 TGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGC 110784
|||||| || || || || | ||| ||||| || | ||||| || || ||||| |||||
Sbjct 203671 TGGTTCGAAACACTCGTTGTAACCTAAGATCTGAGATGTGGATGCAGTAGGCATAGGTGC 203612
Query 110785 CATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAG 110842
||| ||||| ||| | || ||| | |||| ||||| | | ||| |||||
Sbjct 203611 CATGGTCAAAGA--GTTTCTAATACCATGCTCCATGATGTTATTTCTCAGAGTGTCCCAA 203554
Query 110843 TCGTAGTTGAGCT-TGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGC 110901
|| | | | |||||| | |||||||||| || ||||| | ||||| || ||
Sbjct 203553 TCCCACATACCGTATGGTTTTTGGT-CCCACATGTCGAATTGAAGTATACCTTGAGAAGC 203495
Query 110902 GGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTC 110961
|| || || | ||||||||| || | || | || ||| |||||||| || ||
Sbjct 203494 CGGGGAGCCTTTAAAGGTTTCGTATGGGCCATCTCTTTGAGCTAATTCACAAGAAGCTTC 203435
Query 110962 CAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA-TCTCCTTGGCTTCATCTG 111020
|| ||| || || || || ||||| ||||| || ||| | | | | ||||| ||||
Sbjct 203434 CATGGAGGCATGGTAGATAGTTTCGAAGATTTGAATATTTAGTAAGCGT-GCTTCTTCTG 203376
Query 111021 AATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 111080
| || |||| | || |||| || || || || | |||||| ||||||||| |||
Sbjct 203375 AGTCGAATGGCAAACGCAACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAA 203316
Query 111081 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAA 111140
| || || |||| ||||||||| ||| || ||| || |||||| | || | |||||
Sbjct 203315 TCGGCCTATGTCTCATATTAGATCTTCTTGCTTCCTCGACAGGATAATAGTTACGGTCAA 203256
Query 111141 TGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAG-TTTTTCA-----T 111194
| || ||||| || |||| || || | |||||||| || ||||| | |
Sbjct 203255 TAACGTTGTTTAAGTTACGAGTAATAACTTTAGAAATTTCATGTAGCTTTTTGAAGTTGT 203196
Query 111195 AATCAAAAGTGCGAGTCTCTTCA----TTGACATACTT--TGGAAGGGCGATTGATGCCA 111248
| | |||| |||||| || ||| | ||| | || | || ||||
Sbjct 203195 ATGTAGAAGTTTTGCCGTCTTCAGATGTTTCAATAAATGCTGGCAAAGCAACAGAAGCCA 203136
Query 111249 AATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGG 111308
| || |||||||| |||||||| | | | ||| || | |||||| || || || |
Sbjct 203135 AGTTACAAACAGCAGTCTCATCTGGAGCAGAGTATTCAACAATTTCACAGCACAAATTAG 203076
Query 111309 AACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGA 111368
| ||| || ||||| ||||||||||| ||| |||| || ||||||||||| |
Sbjct 203075 ATGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCTGTTACAAGCATCCTTGTAAA 203016
Query 111369 GCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCG 111427
| | || || || || ||||| |||| || | |||| | ||| || | | |
Sbjct 203015 CAACAAATGGTGTACCAGTTTCCGTTTGTGCTTCCAAGATAGAGTACCATAATTTTTGGG 202956
Query 111428 GCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 111487
|| | || | || | || || || ||||| || || |||||||| ||
Sbjct 202955 CCTTG----ATAGTCTTACCACGACCTTCTTTTTCGTAACGGGTATATAGGGCTTCGAAT 202900
Query 111488 TCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTCTGGACAGAAAAGAGACCATTG 111546
|| ||||| ||| | ||||| || ||| ||| |||| | || |||
Sbjct 202899 TCATCACCGTAACAGTCACTCAAGCCTGGGGCAGATGT-AGGAGAGAATAAAGTCCAAGT 202841
Query 111547 ACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 111606
|| ||| || || |||||||||||||| ||||||| ||| || | | || | |||
Sbjct 202840 GCCGTTTTCTTCGACACGCTTCATGAAAAGATCTGGAACCCATAGAGCAGGGAATAAATC 202781
Query 111607 TCT-ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATAT 111665
||| ||| || ||||| | ||| || || || | || | ||| || | |||||
Sbjct 202780 TCTCGCACGGA-TTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATAT 202722
Query 111666 CCGCGTGCCATGGCTC--AAGATAG----ACTGCGATAGATCCCTTTCGACGCCCAGCTT 111719
| |||||||||||||| || |||| | || || || ||| | ||| |||
Sbjct 202721 CAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTGTTA---CCACCTT 202665
Query 111720 GATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATT 111779
| | ||||| || || || ||| || || || | ||| ||||| | || | ||
Sbjct 202664 GGTCAACATAACGGGCAGTATTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAG 202605
Query 111780 GACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAA 111839
|| ||||| || ||| ||| | || | | | ||||| || | ||||
Sbjct 202604 TCCCGTTTGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGGATATGTAGACCAA 202545
Query 111840 TACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGA 111899
|||| ||||| || || || ||||| ||| | | ||| | || ||||| | |
Sbjct 202544 TACCTCCAGCAGTTTTAGAAATCAAAGCACATTCCTTCAAAGTATCGTAAATACCTTCAA 202485
Query 111900 TTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAG 111959
| || || ||||| | || | | ||| || |||||| || || |||| |||||||
Sbjct 202484 TGGAATCATCCTTCATTGCAACTAAGAAACAGGAGGACATTTGAGGCTTTGGAGTACCAG 202425
Query 111960 CATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGTC 112018
| ||||| | ||||| | || ||| | || || || | ||||| || || ||
Sbjct 202424 CGTTGAATAAAGTTGGAGAGGCATGAGT-AAAGTATTTTAGAGACATTAAGTTATAGGTT 202366
Query 112019 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTAC 112078
|| || | | ||||||| ||| ||||| || || | ||||| | ||||| | || |
Sbjct 202365 TCTAAAGCGGCCTCAATGTTTTCACCGTGAATACCTAGGGCGACTCTCATGATTAAGTGC 202306
Query 112079 TGTGG 112083
|||||
Sbjct 202305 TGTGG 202301
Score = 87.8 bits (96), Expect = 2e-12
Identities = 111/150 (74%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 11705 GCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGAT-GAATGGGAC 11763
|||||||| ||||||||||| ||||| || | | |||| ||| | | ||| || ||
Sbjct 92429 GCACCCACCCCAACAAACATTTCCACGAACTCGGAACCAGA-CACGGAAAAGAAGGGCAC 92487
Query 11764 ATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGC 11823
|| | || |||||| |||| ||| | ||||||||| || |||||||| || |
Sbjct 92488 GTTGGCCTCGCCCGCGGTGGCCTTGGCCAAGAGGGTCTTACCGGTACCTGGAGGCCCGGA 92547
Query 11824 GAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853
|||| ||||||||||||||| ||||| ||
Sbjct 92548 AAGAATGGCGCCTCGGGGGATTTTGGCGCC 92577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627957484003200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |