Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq38 250 3e-61 >seq38 Length=131761 Score = 250 bits (276), Expect = 3e-61 Identities = 867/1339 (65%), Gaps = 38/1339 (3%) Strand=Plus/Plus Query 104266 AGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACG 104324 ||| || || ||| || || || || || |||||| | || ||| || | ||||| Sbjct 125372 AGATATCGAGGCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTT-ACTCACG 125430 Query 104325 CAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTA 104384 | | ||||| | |||||||| ||||| |||| ||| ||||||||| ||| ||| | Sbjct 125431 CCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGG 125490 Query 104385 TCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAA 104444 | |||| ||||||||||| ||| | || || || | || | | ||| ||||| | Sbjct 125491 TTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGA 125550 Query 104445 TCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTC 104504 | || || ||||| |||||||| | || |||||| | | | | | | ||| Sbjct 125551 TTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCTT 125610 Query 104505 GTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACG 104564 ||| || ||||| ||| || | ||| | ||||| ||| |||| || || || Sbjct 125611 ACATTGCTGGTACAAACGGTACTTCTAACGGTTTAATTCCTATGATTCGTGTTTTCAATA 125670 Query 104565 CCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTAT 104620 ||| || || ||||| | || | ||| | |||| || | | || | || Sbjct 125671 ACACTGCCCGTTATGTTGACCAGGGTGGTAAT-AAAAGACCTGGTGCGTTTGCCCTTTAC 125729 Query 104621 CTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGAC 104680 || || |||||||| || ||||| | || || |||| | | ||||| ||| | Sbjct 125730 CTGGAACCATGGCATGCTGATATATTTGATTTTATTGATATTAGGAAGAACCACGGTAAA 125789 Query 104681 GAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAA 104739 ||||| | |||| | ||| | ||| | ||||| |||||||| ||||| |||||||| Sbjct 125790 GAGGAAATTC-GTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATGAA 125848 Query 104740 GAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACA-AGGCACCTGGTCTCT 104798 | | || || || | ||| | ||| | | || | |||| ||| || |||||| | Sbjct 125849 GCGTGTCGAAGAAAATGGGACCTGGACATTATTCTCTCCA-ACATCAGCTCCTGGTTTAA 125907 Query 104799 CCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGG 104858 |||| ||||| |||||||| || || || || |||||| |||||||||| | Sbjct 125908 GCGATTGTTACGGTGACGAGTTTGAGGCTCTATATACCCGCTACGAGAAAGAAGGTCGTG 125967 Query 104859 CGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGA 104918 | ||| | ||| | | ||| | | ||| | | ||||||| || | Sbjct 125968 ---GTAAGACTATCAAAGCCCAAAAATTATGGTATTCCATTTTGGAAGCTCAAACTGAAA 126024 Query 104919 CTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATT 104978 |||||||||| | | | ||||||| || || |||||| ||| ||||||||| || | Sbjct 126025 CTGGTACACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAATCTAATCAAAAAAACT 126084 Query 104979 TGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATG 105038 | ||||| |||||| || || | || ||||| | |||| ||| ||||| Sbjct 126085 TAGGTGTCATCAAGTCATCAAACTTATGCTGTGAAATTGTTGAATACTCAGCTCCAGATG 126144 Query 105039 AGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCC------------CAAGTATGTGG 105086 | || ||||| |||||| | || || | || | || | | || || Sbjct 126145 AAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTACCAGCATTCATTGAAACTTCTGAGG 126204 Query 105087 ATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCA 105146 || |||| |||| | | ||||| | || ||| || | ||| ||| || Sbjct 126205 ATGGTAAGACTTCCACATACAACTTCAAAAAATTACATGAAATTGCTAAAGTTGTTACTC 126264 Query 105147 AAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTA 105206 || |||||||||| |||||| | |||| ||||| ||||| || | ||||| | Sbjct 126265 GTAATTTAAACAGAGTCATTGATCGTAATTACTACCCTGTTGAAGAAGCGAGAAAATCCA 126324 Query 105207 ATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTT 105266 |||||||||| | ||||||| | | |||||||| |||||||| || ||||| || | Sbjct 126325 ATATGAGACATAGACCAATTGCTTTGGGTGTTCAAGGTCTCGCTGACACTTTCATGCTGT 126384 Query 105267 GTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCA 105326 || |||||||||| || ||||| | ||| | || ||||| || | Sbjct 126385 TACGTTTGCCATTTGATTCTGAGGAAGCCCGTTTGCTAAATATCCAAATCTTTGAAACTA 126444 Query 105327 TGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAA 105386 | ||||| ||| | | || || || || | || || || |||||||| |||| Sbjct 126445 TTTATCATGCCTCCATGGAAGCTTCTTGTGAACTAGCTCAGAAGGACGGTCCATACGAAA 126504 Query 105387 CCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGA 105446 | || | || ||||| ||||| ||||| | || || ||||||||||||| | | | Sbjct 126505 CTTTCCAAGGATCTCCTGCTTCTCAAGGTATACTACAGTTTGATATGTGGG-ACCAAAAA 126563 Query 105447 CCAAGCTTCA-CTACGACTGGGAAGCTCTCAAGGAACG-CATCAAGGAGAAGGGTCTTCG 105504 || | || | || ||||| | || ||| || | |||| | || | ||| || | Sbjct 126564 CCCTACGGCATGTGGGATTGGGACAC-CTTAAGAAAAGATATCATGAAGCATGGTATTAG 126622 Query 105505 TAACAGTCTCCT----CATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTA 105560 || |||| |||||| |||||||| || || ||||| | ||||| |||||| Sbjct 126623 AAA----TTCCTTGACCATGGCACCAATGCCTACTGCATCCACATCCCAAATATTGGGTT 126678 Query 105561 ATAATGAATGCTTTGAACC 105579 |||||||||| || ||||| Sbjct 126679 ATAATGAATGTTTCGAACC 126697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583191596106080