Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq187 82.4 4e-11 >seq187 Length=36021 Score = 82.4 bits (90), Expect = 4e-11 Identities = 260/396 (66%), Gaps = 9/396 (2%) Strand=Plus/Minus Query 64876 AATGTCAGTACTAAATCCTGTGCCAATACCCTTTGAGCCATTTATTAAAATCATCGGAAT 64935 ||||| |||||| | || ||||||||||||| | || || | | |||||| |||| Sbjct 17180 AATGTAAGTACTCCAGCCAGTGCCAATACCCTCAGCACCGTTAACAAGAATCATAGGAAG 17121 Query 64936 AATTGGTGCATAAAAGATAGGCTCAACAATGAGACCATCATCATCCAAATACTT-CAAAA 64994 ||||||| ||| | ||||| || | |||| || | | ||| || | || Sbjct 17120 AATTGGTAAATACCACTCTGGCTCCACTGTTTTCTCATCTTCTTGTATATATTTGTATAA 17061 Query 64995 TGGCATCATCCTCTTTTGGAAATATAGAACGAGTTATTTTATTCAATTGAGTATAAATAT 65054 ||| |||||| | ||||||| |||||||| ||| ||||||| || || |||| Sbjct 17060 TGG-ATCATCAGCAGGGTGAAATATCTTACGAGTTAATTTGTTCAATTCTGTGTAGATAT 17002 Query 65055 ATCT---TTCGGATGCGTGGTCTTGTCCAGTTCGTCGTGTTCCAAACTGACCATTTGGCA 65111 |||| | | | ||| | | ||||| || ||| || || ||| || || | Sbjct 17001 ATCTCGCTGCCGCTGCATCTTTACCACCAGTGGCTCTTGTACCGAAAGCACCGTTAGGTA 16942 Query 65112 TTAATAAATTAATATTGTTTGAACCAATAAAATTCTGAGCCATTCCGATAATTGCTGCAT 65171 || || | ||||||||| || |||| ||| || || || | || ||||| | | Sbjct 16941 ATAGCAAGTAAATATTGTTGGACCCAACAAAGTTTTGGGCTAGCCCAATAATAGTTTGTG 16882 Query 65172 TTAA--ACTCGCTTCACCGTGATGATATCCTGAATGTTCAGAGACATATCCACTAAATTG 65229 || ||| || ||||| || |||||| | | | |||| || ||| || ||| Sbjct 16881 CCAATGACT-GC-TCACCATGGTGATATGCCGTACATTCACTCACGTATGGTGCAAGTTG 16824 Query 65230 AGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAAA 65265 ||| ||||| | ||||| ||||||| ||||| || Sbjct 16823 AGCTACTTTCAGTTCCGACTTTAAATTTTTTTTGAA 16788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235652735653800