Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_028104.1
Length=73689
Score E
Sequences producing significant alignments: (Bits) Value
seq187 82.4 4e-11
>seq187
Length=36021
Score = 82.4 bits (90), Expect = 4e-11
Identities = 260/396 (66%), Gaps = 9/396 (2%)
Strand=Plus/Minus
Query 64876 AATGTCAGTACTAAATCCTGTGCCAATACCCTTTGAGCCATTTATTAAAATCATCGGAAT 64935
||||| |||||| | || ||||||||||||| | || || | | |||||| ||||
Sbjct 17180 AATGTAAGTACTCCAGCCAGTGCCAATACCCTCAGCACCGTTAACAAGAATCATAGGAAG 17121
Query 64936 AATTGGTGCATAAAAGATAGGCTCAACAATGAGACCATCATCATCCAAATACTT-CAAAA 64994
||||||| ||| | ||||| || | |||| || | | ||| || | ||
Sbjct 17120 AATTGGTAAATACCACTCTGGCTCCACTGTTTTCTCATCTTCTTGTATATATTTGTATAA 17061
Query 64995 TGGCATCATCCTCTTTTGGAAATATAGAACGAGTTATTTTATTCAATTGAGTATAAATAT 65054
||| |||||| | ||||||| |||||||| ||| ||||||| || || ||||
Sbjct 17060 TGG-ATCATCAGCAGGGTGAAATATCTTACGAGTTAATTTGTTCAATTCTGTGTAGATAT 17002
Query 65055 ATCT---TTCGGATGCGTGGTCTTGTCCAGTTCGTCGTGTTCCAAACTGACCATTTGGCA 65111
|||| | | | ||| | | ||||| || ||| || || ||| || || |
Sbjct 17001 ATCTCGCTGCCGCTGCATCTTTACCACCAGTGGCTCTTGTACCGAAAGCACCGTTAGGTA 16942
Query 65112 TTAATAAATTAATATTGTTTGAACCAATAAAATTCTGAGCCATTCCGATAATTGCTGCAT 65171
|| || | ||||||||| || |||| ||| || || || | || ||||| | |
Sbjct 16941 ATAGCAAGTAAATATTGTTGGACCCAACAAAGTTTTGGGCTAGCCCAATAATAGTTTGTG 16882
Query 65172 TTAA--ACTCGCTTCACCGTGATGATATCCTGAATGTTCAGAGACATATCCACTAAATTG 65229
|| ||| || ||||| || |||||| | | | |||| || ||| || |||
Sbjct 16881 CCAATGACT-GC-TCACCATGGTGATATGCCGTACATTCACTCACGTATGGTGCAAGTTG 16824
Query 65230 AGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAAA 65265
||| ||||| | ||||| ||||||| ||||| ||
Sbjct 16823 AGCTACTTTCAGTTCCGACTTTAAATTTTTTTTGAA 16788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 235652735653800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |