Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq12 123 3e-23
seq8 122 1e-22
>seq12
Length=290010
Score = 123 bits (136), Expect = 3e-23
Identities = 337/511 (66%), Gaps = 10/511 (2%)
Strand=Plus/Minus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTG----AGACG 53248
||||||| || ||| | ||||| ||||| ||| || || ||||||| ||||
Sbjct 208218 TCATGCGTGTGGCCCTAGGTATTCACGGCAGCGA-TAT---CGAGTCCGTGCTGAAGACT 208163
Query 53249 TACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGT 53308
||| |||| ||| | ||||| || ||||| | || || || || || || |||
Sbjct 208162 TACAACTTGATGTCGTTGAGATACTTCACCCACGCTTCCCCCACACTATTTAATGCCGGT 208103
Query 53309 ACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGAC 53368
||| || ||||| ||||| || |||||| | || |||||||| ||||| || ||
Sbjct 208102 ACGCCACATCCTCAAATGTCTTCTTGTTTCCTGATTGCCATGAAGGACGACTCCATTGAA 208043
Query 53369 GGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGT 53428
|| || ||||| || | || ||||||||| || |||||| | |||||| | |||
Sbjct 208042 GGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCCAAGACTGCAGGTGGTGTTGGT 207983
Query 53429 ATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCC 53488
| || | || | ||| | | ||| | || || || ||||| |
Sbjct 207982 CTTCATATCAACAATATTCGTTCCACAGGCTCTTATATTGCAGGTACCAACGGTACTTCA 207923
Query 53489 GATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGT 53548
| || | | || ||| |||| |||||||||||||| || || ||||| |||| |||
Sbjct 207922 AACGGGTTGATTCCCATGATCCGTGTCTTCAACAACACTGCACGTTACGTGGACCAAGGT 207863
Query 53549 GGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATG 53608
||| ||| | || | || ||| | | | | ||||| ||||| || ||||| |
Sbjct 207862 GGTAACAAGAGACCCGGTGCCTTTGCCCTTTTCTTGGAGCCATGGCATGCAGACATCTTC 207803
Query 53609 GAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT 53667
|| ||| |||| | | || ||| ||| | ||||| || || ||| | || ||||
Sbjct 207802 GACTTTGTCGATATCAGAAAGACTCATGGTAAGGAAGAAATTCG-TGCAAGAGATTTGTT 207744
Query 53668 TACAGCTCTGTGGATTCCGGACCTCTTCATG 53698
| ||||| |||||||| || || ||||||
Sbjct 207743 CCCTGCTCTATGGATTCCCGATCTTTTCATG 207713
>seq8
Length=326064
Score = 122 bits (134), Expect = 1e-22
Identities = 335/508 (66%), Gaps = 4/508 (1%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251
||||| | |||||| | ||||| |||||||| || | | || | || || ||
Sbjct 202314 TCATGAGAGTCGCCCTAGGTATTCACGGTGAAAACATTGAGGCCGCTTTA-GAAACCTAT 202372
Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311
|||||||| | ||| |||||||| || ||| | ||||| | ||||||||||||||
Sbjct 202373 AACTTAATGTCTCTAAAATACTTTACTCATGCCTCTCCAACTTTATTCAACGCTGGTACT 202432
Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371
| ||||| ||||| ||| ||| | || || ||||||||||| || || || ||
Sbjct 202433 CCAAAGCCTCAAATGTCCTCCTGTTTCTTAGTTGCAATGAAGGATGATTCCATTGAAGGT 202492
Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431
|| ||||| || | ||||| ||||| || || || | || ||||| ||| |
Sbjct 202493 ATTTACGATACTTTGAAGGAATGTGCTTTGATTTCTAAAACTGCTGGAGGTATTGGTCTA 202552
Query 53432 CACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGAT 53491
|| | ||| | ||||| | |||| | || || || ||||| | |
Sbjct 202553 CATATCCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACAAACGGGACTTCTAAC 202612
Query 53492 GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551
|| | | |||||| |||| ||||||||||| || ||||| || || |||| ||||||
Sbjct 202613 GGGTTAATTCCTATGATCCGTGTCTTCAACAATACTGCCCGTTATGTTGACCAAGGTGGT 202672
Query 53552 GGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAG 53611
||| | || | || || | || | ||||| |||||||| || || | ||
Sbjct 202673 AACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCACGCTGATATCTTCGAC 202732
Query 53612 TTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTAC 53670
|| |||| | | |||||| ||| | ||||| || || ||| | || | || |
Sbjct 202733 TTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAATCCG-TGCGAGAGATTTATTCCC 202791
Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATG 53698
||||| ||| |||| || || ||||||
Sbjct 202792 TGCTCTATGGGTTCCAGATCTTTTCATG 202819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547151072821600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |