Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_028665.1 Length=56982 Score E Sequences producing significant alignments: (Bits) Value seq9489 100 1e-16 >seq9489 Length=379987 Score = 100 bits (110), Expect = 1e-16 Identities = 172/244 (70%), Gaps = 18/244 (7%) Strand=Plus/Plus Query 5557 TACCTCGAATACTCGGCGTTCTCCCGTTCGGGCCTGATCAAGCAACTCGCGTTCGAGGGA 5616 |||||||| ||| |||||| ||||||||||| ||| ||| |||| ||||||||| Sbjct 18242 TACCTCGACCTGACGGGGTTCTCGCGTTCGGGCCTCATCGGGCAGCTCGAGTTCGAGGGT 18301 Query 5617 TTCAGCGACGCCGACGCGACGTTCGCCGTCGACTCG-CTCGACACCGAT----------- 5664 |||||| |||||||| ||||||| ||| ||| ||||| |||| Sbjct 18302 TTCAGCACGGCCGACGCCGAGTTCGCCATCGT-TCGACTCGAGGCCGAGGGCGGCGTTGA 18360 Query 5665 -TGGGATGCGCAGGCGGTGAAGAAAGCCGCCGAG-TACATGGATTACTCGTCGTTCTCGC 5722 ||| | ||| |||||| || || || ||| ||| | || | ||||||||||| Sbjct 18361 CTGGAACGCGGAGGCGGCCGAGTGCGCGGC-GAGCTACCTCGACTTGATGTCGTTCTCGC 18419 Query 5723 -AGCAGGGCCTCGTCGATCAACTCGTGTTCGAGGGATTCACGCAGGCGCAGGCCGAGCAC 5781 ||| || |||||||| || | | ||||| |||||||||| || ||| |||||| || Sbjct 18420 GAGC-CGGTCTCGTCGACCAGTTGCTCTTCGAAGGATTCACGCCGGAGCAAGCCGAGTAC 18478 Query 5782 GGAG 5785 |||| Sbjct 18479 GGAG 18482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 182200260526976