Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_028770.1 Length=59878 Score E Sequences producing significant alignments: (Bits) Value seq9489 138 4e-28 >seq9489 Length=379987 Score = 138 bits (152), Expect = 4e-28 Identities = 287/421 (68%), Gaps = 10/421 (2%) Strand=Plus/Plus Query 5841 CGGCCCAGCAGGGACGGGGAAGACCTTCCTGGCCATCCACCACGGCC-TGCGCCTGCTGG 5899 |||||| || || ||||| ||||| | ||| || || | | |||| ||| |||| Sbjct 239436 CGGCCCCGCGGGCACGGGCAAGACGTACCTCGCGATGG-CGAAGGCCGTGCAGGCGCTGC 239494 Query 5900 AGGCCGGGGAGATCCAGCGCCTCGTCATCACCCGGCCCGCCGTTGAGGCAGATGAGAAGC 5959 || | | || || | ||| || || |||| || || ||||| ||||| | ||| || Sbjct 239495 AGTCGAAGCAGGTCAACCGCATCATCCTCACGCGCCCGGCCGTCGAGGCGGGGGAGCGGC 239554 Query 5960 TCGGCTTCCTGCCCGGCACTGTGGACGAGAAGATGGCACCCTACCTCACCCCGATGCTGG 6019 |||| |||||||||||| | || |||||||| | || ||||| |||| || | Sbjct 239555 TCGGGTTCCTGCCCGGCTCGCTGACGGAGAAGATCGACCCGTACCTGCGCCCGCTGTACG 239614 Query 6020 ACGCGGTGATCGACCTGGTCGGCCCG---ACGATGACGAAGCGCCTCCTCGAGTCGCGCC 6076 ||||| || |||| || ||| |||| |||| | ||| ||| ||||| | || Sbjct 239615 ACGCGCTGCACGACATGATCGACCCGGACTCGATCCCCAAG---CTCATCGAGGCCGGCA 239671 Query 6077 AGCTGGAGGTCGCCCCGCTGGCCTACATGCGAGGCCGGACGTTCAACGACACGTACATCG 6136 | | |||||||| ||||| || | |||||| || || | |||||||| ||| |||| Sbjct 239672 CGATCGAGGTCGCGCCGCTCGCGTTCATGCGCGGGCGCAGCCTCAACGACTCGTTCATCA 239731 Query 6137 TCGCTGACGAGATGCAGAACGCCACC-CCGCGCCAGACCGCGCTGCTGGTGACCCGCCTG 6195 || |||||| ||||||| | ||| ||| | |||| | || | | || ||||| Sbjct 239732 TCCTCGACGAGGCGCAGAACACGACCACCGAG-CAGATGAAGATGTTCCTCACGCGCCTC 239790 Query 6196 GGCTTCGGGACGAAGGCCGTCCTGAACGGTGACCCGGCCCAGTGCGACCTGCCGCCCGGC 6255 ||||||||| || ||| | | || ||| || | ||| |||||||||| |||| Sbjct 239791 GGCTTCGGGTCGCGCATGGTCATCACGGGCGACGCGACGCAGGTCGACCTGCCGGGCGGC 239850 Query 6256 A 6256 | Sbjct 239851 A 239851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 191466415951360