Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_028778.1 Length=75626 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 1e-11 >seq1 Length=1297082 Score = 84.2 bits (92), Expect = 1e-11 Identities = 181/270 (67%), Gaps = 3/270 (1%) Strand=Plus/Plus Query 55434 GGCAACCTCACCGCTGATCCGGAACTGAGGTTCTTGGACTCCGGCGTGGCGGTCGCTCAG 55493 || |||||||| | || ||||| ||| | ||| ||| || | |||||| || | Sbjct 1125040 GGGAACCTCACGGGAGACCCGGAGCTGCGTTTCACCCCCTCGGGTGCGGCGGTGGCCAAC 1125099 Query 55494 TTCTCGGTGGCGTCTACTCCCCGCAAGTTCAACAAGCAGACGAACGAGTGGGAGGACGGC 55553 ||| |||||||||| || || || | ||| || ||| ||||||||||| ||||||| Sbjct 1125100 TTCACGGTGGCGTCCACGCCGCGGACCTTCGACCGCCAGTCGAACGAGTGGAAGGACGGG 1125159 Query 55554 GAAACCGTGTTCCTCCGTACGTCGGTGTGGCGCGAGCTTGCAGAGGGCGCGGCTGAGAAC 55613 || ||| ||||| | || ||| | ||||||||| || ||| || || ||| Sbjct 1125160 GACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGAGAACGTCGCGGAGTCG 1125219 Query 55614 CTGCGTAAGGGTGACAACGTTGTCGTGATCGGCAACCTCAAGCAGCGCGCTTACGAGA-- 55671 ||| ||||| ||| ||||| ||| |||| |||||| | ||||||| Sbjct 1125220 CTGACGAAGGGCATGCGCGTCATCGTGCAGGGCCGCCTCGTCCAGCGCTCGTACGAGACC 1125279 Query 55672 -AGGACGGCCAGACTCGCACCGTCTTTGAG 55700 || || ||| ||||||||| | ||| Sbjct 1125280 CGCGAGGGGGAGAAGCGCACCGTCGTCGAG 1125309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 241850418599644