Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_028843.1 Length=75816 Score E Sequences producing significant alignments: (Bits) Value seq6 84.2 1e-11 seq1 84.2 1e-11 >seq6 Length=371824 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 63272 GGTTGTAGCGCAGCTTGGTAGCGCGCCTGATTTGGATTCAGGGGGTCGGAGGTTCAAATC 63331 || ||| ||||||||||||||||| ||||| | || ||||||||||| ||||||||||| Sbjct 297784 GGCTGTGGCGCAGCTTGGTAGCGCACCTGACTGGGGGTCAGGGGGTCGCAGGTTCAAATC 297843 Query 63332 CTTCCAGCCAGACA 63345 || ||||| |||| Sbjct 297844 CTGTCAGCCCGACA 297857 >seq1 Length=1297082 Score = 84.2 bits (92), Expect = 1e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 55286 GGCAACCTCACCGCTGATCCGGAACTGAGGTTCTTGGACTCTGGCGTGGCGGTCGCTCAG 55345 || |||||||| | || ||||| ||| | ||| ||| || | |||||| || | Sbjct 1125040 GGGAACCTCACGGGAGACCCGGAGCTGCGTTTCACCCCCTCGGGTGCGGCGGTGGCCAAC 1125099 Query 55346 TTCTCGGTGGCGTCTACTCCCCGCAAGTTCAACAAGCAGACGAACGAGTGGGAGGACGGC 55405 ||| |||||||||| || || || | ||| || ||| ||||||||||| ||||||| Sbjct 1125100 TTCACGGTGGCGTCCACGCCGCGGACCTTCGACCGCCAGTCGAACGAGTGGAAGGACGGG 1125159 Query 55406 GAAACCGTGTTCCTCCGTACGTCGGTGTGGCGCGAG 55441 || ||| ||||| | || ||| | ||||||||| Sbjct 1125160 GACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAG 1125195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242458348263924