Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_028904.1 Length=49452 Score E Sequences producing significant alignments: (Bits) Value seq13 109 2e-19 >seq13 Length=283376 Score = 109 bits (120), Expect = 2e-19 Identities = 177/249 (71%), Gaps = 7/249 (3%) Strand=Plus/Minus Query 39941 GCTCGGCGTGCCGTAGCGCGCCT-CGATGTAGCGGAGACCGGCGACGATCTGCCGCTCAG 39999 || ||||| ||||||| | ||| |||||||| ||| || | |||||||| | | | Sbjct 197013 GCACGGCGAGCCGTAG-GAGCCGGCGATGTAGTCGAGGCCCCAGGCGATCTGCGTCGCGG 196955 Query 40000 GGTCGGAGGTCTTCGCGATGCCGTAGCCAGCCCATGTGGAGTC---CAGGAACTGGGCGA 40056 ||| || | | || ||| | || ||| | ||| | ||| |||| | || Sbjct 196954 GGTTGGTCGCCCAGTCGGCGCCCTTGCTCGCCATCTTCGAGCCGGGCAGCGACTGCGGGA 196895 Query 40057 TCCCGTAGGCGGTGCTCGTCGGGTTCTGTGC-GTCGGGGTTCCAGTCGGACTCGTTGGTC 40115 | ||||||||| | ||||||||| | || |||||| ||||||| |||||| |||||| Sbjct 196894 TGCCGTAGGCGCTCGACGTCGGGTTGTCCGCCGTCGGG-TTCCAGTTGGACTCCTTGGTC 196836 Query 40116 CACAGCTCCTCCAGGGCCTCCCACTCAGCCCCGGTCCACCCCCGCTCGGCTGCGAGGGCC 40175 ||||||| ||| ||| | ||||| | |||||||| || |||||||| || | |||| Sbjct 196835 CACAGCTTCTCGAGGCACGTCCACTGCGAGCCGGTCCAGCCGCGCTCGGCGGCCATGGCC 196776 Query 40176 TTCCCGATC 40184 | ||||||| Sbjct 196775 TGCCCGATC 196767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158106976567856