Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_028906.1
Length=75933
Score E
Sequences producing significant alignments: (Bits) Value
seq17 432 2e-116
seq1 168 3e-37
>seq17
Length=237104
Score = 432 bits (478), Expect = 2e-116
Identities = 578/803 (72%), Gaps = 3/803 (0%)
Strand=Plus/Plus
Query 66456 CCGTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCCCTGGGCATCGGGGGGT 66515
|||| || ||||| ||||| ||||| ||||| |||||| ||| || |||||||| ||
Sbjct 124029 CCGTCGAGGTCATCCCCACGGGCTCCATCGCGCTGGACATCGCGCTCGGCATCGGCGGCC 124088
Query 66516 ACCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGT 66575
||| | || || || | || | |||||||| || || || || ||| | || ||
Sbjct 124089 TGCCGCGCGGGCGCGTCATCGAGGTGTACGGCCCGGAGTCCTCCGGAAAGACGACCGTGG 124148
Query 66576 GTCTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTG 66635
|||||||| ||||||| || ||| ||||| |||| ||| || | ||||||||| |
Sbjct 124149 CGCTCCACGCCGTGGCCAGCGCCCAGCGCGCCGGCGGCATCGCGGCGTTCATCGACGCCG 124208
Query 66636 AGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGG 66695
||||| | || ||||| |||||||||||| |||||| || ||| |||| ||| | |
Sbjct 124209 AGCACGCACTCGACCCGGAGTACGCCAAGAAGCTCGGCGTCGACACCGACGCCCTGCTCG 124268
Query 66696 TGGTTCAGCCCGATACCGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTG 66755
| ||||| || || || |||||||| || |||||| ||| | || || || |
Sbjct 124269 TCTCCCAGCCGGACACGGGGGAGCAGGCGCTCGAGATCACGGACATGCTGATCCGCTCGG 124328
Query 66756 GCGAGCTGTCCATCGTCGTCGTTGACTCCGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCG 66815
||| ||| |||| ||||| | |||||||| |||||||| ||||| || ||| |||
Sbjct 124329 GCGCGCTCGACATCATCGTCATCGACTCCGTCGCGGCCCTCGTGCCCAAGGCGGAGATCG 124388
Query 66816 AAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCACAGGCCATGC 66875
| ||||| || || ||||| |||||||| || || || ||||||||||| ||||| |||
Sbjct 124389 AGGGCGAGATGGGCGACAGCCACGTCGGTCTCCAGGCCCGCCTCATGTCGCAGGCGCTGC 124448
Query 66876 GCAAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGC 66935
||||| |||| || | || | || |||| | ||| |||||||| | |
Sbjct 124449 GCAAGATCACCGGTGCGCTCAGCGCGTCCGGCACGACCGCCATCTTCATCAACCAGCTCC 124508
Query 66936 GCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTT 66995
||||||||||||| |||| || |||| | ||||| || || || || |||||
Sbjct 124509 GCGAGAAGATCGG---CGTGTTCTTCGGCTCTCCCGAGACGACGACCGGTGGCAAGGCGC 124565
Query 66996 TGAGGTTCTACGCCTCAGTCCGTATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCG 67055
||| |||||||||||| |||||| | || |||| ||||||| ||| ||||| |||
Sbjct 124566 TGAAGTTCTACGCCTCGGTCCGTCTCGACATCCGCCGCATCGAGACCCTCAAGGAGGGCA 124625
Query 67056 ATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGC 67115
|| || ||||||||||| ||||| ||||||||||||||||||||| |||| ||||||
Sbjct 124626 CCGACGCGGTCGGCAACCGGACCCGCGTGAAGGTCGTCAAGAACAAGATGGCGCCGCCGT 124685
Query 67116 ACCGCAATGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCC 67175
| | ||||||||| | || | ||||||| |||||||| || |||| | |||
Sbjct 124686 TCAAGCAGGCCGAGTTCGACATCCTCTACGGGGTCGGCATCTCCCGCGAGGGTGGCCTCA 124745
Query 67176 TCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGG 67235
||||| ||| |||| ||| || | ||| ||||| || | ||||||| ||||| |
Sbjct 124746 TCGACATGGGCGTGGAGCACGGGTTCGTGCGCAAGTCCGGGTCGTGGTTCACCTACGGCG 124805
Query 67236 ACAAGAACGTCGCCCAGGGCAAG 67258
| | | ||| |||||||||
Sbjct 124806 GCGACCAGCTCGGGCAGGGCAAG 124828
>seq1
Length=1297082
Score = 168 bits (186), Expect = 3e-37
Identities = 213/292 (73%), Gaps = 13/292 (4%)
Strand=Plus/Plus
Query 60238 GACCCCGAGCTGCGGTTCACCCAAGGTGGGCAGGCCGTCGCCAACTTCACCGTCGTGTCC 60297
||||| |||||||| ||||||| || ||| || ||||||||||| || | ||||
Sbjct 1125055 GACCCGGAGCTGCGTTTCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCC 1125114
Query 60298 AACGAACGCCGCCG-----CGACGCCCAGGGCAAC---TGGGTCGACGGCGACGCCACAT 60349
| |||||| | |||| |||| ||| ||| ||||| ||| || |
Sbjct 1125115 A-----CGCCGCGGACCTTCGACCGCCAGTCGAACGAGTGGAAGGACGGGGACACCCTGT 1125169
Query 60350 TCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTGGCGGAAAGCCTCCAGAAAG 60409
|| | |||||| | ||||||||||| ||||| |||||||| ||||| || ||| |
Sbjct 1125170 TCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGAGAACGTCGCGGAGTCGCTGACGAAGG 1125229
Query 60410 GCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCCTTCGAGACCAAGGAGGGCG 60469
|| ||||||||||||||| ||| |||| |||||||| | ||||||| ||||| |
Sbjct 1125230 GCATGCGCGTCATCGTGCAGGGCCGCCTCGTCCAGCGCTCGTACGAGACCCGCGAGGGGG 1125289
Query 60470 ACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGCCCGTCGCTGCG 60521
| |||||||||||| ||||| || |||| ||||||||||| || || |||||
Sbjct 1125290 AGAAGCGCACCGTCGTCGAGCTGCAGGTGGACGAGATCGGTCCCTCCCTGCG 1125341
Score = 122 bits (134), Expect = 4e-23
Identities = 148/198 (75%), Gaps = 8/198 (4%)
Strand=Plus/Plus
Query 50494 CCACCCCAGGACCTAGCCGCCGAG-TCAGCAGTCCTCGGCGCCATGCTTCTCTCCAAGAA 50552
|| ||||||||| | ||||||||| | ||| || ||||||| |||||| || || ||| |
Sbjct 1128287 CCGCCCCAGGACGTCGCCGCCGAGATGAGC-GTGCTCGGCGGCATGCTGCTGTCGAAGGA 1128345
Query 50553 CGCCACCCCGGCCGTCATGGAG---ATTCTCAAGCCCGAGGACTTCTACCGCCCCAACCA 50609
||||| | ||| |||||| ||| || | | |||| |||||||||||| ||
Sbjct 1128346 CGCCATCGCGGACGTCATCGAGCAGATCCGCGGCTCCGA---CTTCTACCGCCCGGCGCA 1128402
Query 50610 CGCCACCGTCTACCAGATCATCACCGACCTCTACATGGCCGGTGAGTCCGCCGACGTCAT 50669
|| | ||||||| || |||| |||||||||| ||| ||| ||||||||| ||
Sbjct 1128403 CGAGATCGTCTACGAGTCGATCATCGACCTCTACGGTCGCGGCGAGCCCGCCGACGCGAT 1128462
Query 50670 CACCGTCGCCGCGGAGCT 50687
|||||||| |||||||||
Sbjct 1128463 CACCGTCGTCGCGGAGCT 1128480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 242832704951928
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |