Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_028906.1 Length=75933 Score E Sequences producing significant alignments: (Bits) Value seq17 432 2e-116 seq1 168 3e-37 >seq17 Length=237104 Score = 432 bits (478), Expect = 2e-116 Identities = 578/803 (72%), Gaps = 3/803 (0%) Strand=Plus/Plus Query 66456 CCGTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCCCTGGGCATCGGGGGGT 66515 |||| || ||||| ||||| ||||| ||||| |||||| ||| || |||||||| || Sbjct 124029 CCGTCGAGGTCATCCCCACGGGCTCCATCGCGCTGGACATCGCGCTCGGCATCGGCGGCC 124088 Query 66516 ACCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGT 66575 ||| | || || || | || | |||||||| || || || || ||| | || || Sbjct 124089 TGCCGCGCGGGCGCGTCATCGAGGTGTACGGCCCGGAGTCCTCCGGAAAGACGACCGTGG 124148 Query 66576 GTCTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTG 66635 |||||||| ||||||| || ||| ||||| |||| ||| || | ||||||||| | Sbjct 124149 CGCTCCACGCCGTGGCCAGCGCCCAGCGCGCCGGCGGCATCGCGGCGTTCATCGACGCCG 124208 Query 66636 AGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGG 66695 ||||| | || ||||| |||||||||||| |||||| || ||| |||| ||| | | Sbjct 124209 AGCACGCACTCGACCCGGAGTACGCCAAGAAGCTCGGCGTCGACACCGACGCCCTGCTCG 124268 Query 66696 TGGTTCAGCCCGATACCGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTG 66755 | ||||| || || || |||||||| || |||||| ||| | || || || | Sbjct 124269 TCTCCCAGCCGGACACGGGGGAGCAGGCGCTCGAGATCACGGACATGCTGATCCGCTCGG 124328 Query 66756 GCGAGCTGTCCATCGTCGTCGTTGACTCCGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCG 66815 ||| ||| |||| ||||| | |||||||| |||||||| ||||| || ||| ||| Sbjct 124329 GCGCGCTCGACATCATCGTCATCGACTCCGTCGCGGCCCTCGTGCCCAAGGCGGAGATCG 124388 Query 66816 AAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCACAGGCCATGC 66875 | ||||| || || ||||| |||||||| || || || ||||||||||| ||||| ||| Sbjct 124389 AGGGCGAGATGGGCGACAGCCACGTCGGTCTCCAGGCCCGCCTCATGTCGCAGGCGCTGC 124448 Query 66876 GCAAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGC 66935 ||||| |||| || | || | || |||| | ||| |||||||| | | Sbjct 124449 GCAAGATCACCGGTGCGCTCAGCGCGTCCGGCACGACCGCCATCTTCATCAACCAGCTCC 124508 Query 66936 GCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTT 66995 ||||||||||||| |||| || |||| | ||||| || || || || ||||| Sbjct 124509 GCGAGAAGATCGG---CGTGTTCTTCGGCTCTCCCGAGACGACGACCGGTGGCAAGGCGC 124565 Query 66996 TGAGGTTCTACGCCTCAGTCCGTATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCG 67055 ||| |||||||||||| |||||| | || |||| ||||||| ||| ||||| ||| Sbjct 124566 TGAAGTTCTACGCCTCGGTCCGTCTCGACATCCGCCGCATCGAGACCCTCAAGGAGGGCA 124625 Query 67056 ATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGC 67115 || || ||||||||||| ||||| ||||||||||||||||||||| |||| |||||| Sbjct 124626 CCGACGCGGTCGGCAACCGGACCCGCGTGAAGGTCGTCAAGAACAAGATGGCGCCGCCGT 124685 Query 67116 ACCGCAATGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCC 67175 | | ||||||||| | || | ||||||| |||||||| || |||| | ||| Sbjct 124686 TCAAGCAGGCCGAGTTCGACATCCTCTACGGGGTCGGCATCTCCCGCGAGGGTGGCCTCA 124745 Query 67176 TCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGG 67235 ||||| ||| |||| ||| || | ||| ||||| || | ||||||| ||||| | Sbjct 124746 TCGACATGGGCGTGGAGCACGGGTTCGTGCGCAAGTCCGGGTCGTGGTTCACCTACGGCG 124805 Query 67236 ACAAGAACGTCGCCCAGGGCAAG 67258 | | | ||| ||||||||| Sbjct 124806 GCGACCAGCTCGGGCAGGGCAAG 124828 >seq1 Length=1297082 Score = 168 bits (186), Expect = 3e-37 Identities = 213/292 (73%), Gaps = 13/292 (4%) Strand=Plus/Plus Query 60238 GACCCCGAGCTGCGGTTCACCCAAGGTGGGCAGGCCGTCGCCAACTTCACCGTCGTGTCC 60297 ||||| |||||||| ||||||| || ||| || ||||||||||| || | |||| Sbjct 1125055 GACCCGGAGCTGCGTTTCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCC 1125114 Query 60298 AACGAACGCCGCCG-----CGACGCCCAGGGCAAC---TGGGTCGACGGCGACGCCACAT 60349 | |||||| | |||| |||| ||| ||| ||||| ||| || | Sbjct 1125115 A-----CGCCGCGGACCTTCGACCGCCAGTCGAACGAGTGGAAGGACGGGGACACCCTGT 1125169 Query 60350 TCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTGGCGGAAAGCCTCCAGAAAG 60409 || | |||||| | ||||||||||| ||||| |||||||| ||||| || ||| | Sbjct 1125170 TCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGAGAACGTCGCGGAGTCGCTGACGAAGG 1125229 Query 60410 GCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCCTTCGAGACCAAGGAGGGCG 60469 || ||||||||||||||| ||| |||| |||||||| | ||||||| ||||| | Sbjct 1125230 GCATGCGCGTCATCGTGCAGGGCCGCCTCGTCCAGCGCTCGTACGAGACCCGCGAGGGGG 1125289 Query 60470 ACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGCCCGTCGCTGCG 60521 | |||||||||||| ||||| || |||| ||||||||||| || || ||||| Sbjct 1125290 AGAAGCGCACCGTCGTCGAGCTGCAGGTGGACGAGATCGGTCCCTCCCTGCG 1125341 Score = 122 bits (134), Expect = 4e-23 Identities = 148/198 (75%), Gaps = 8/198 (4%) Strand=Plus/Plus Query 50494 CCACCCCAGGACCTAGCCGCCGAG-TCAGCAGTCCTCGGCGCCATGCTTCTCTCCAAGAA 50552 || ||||||||| | ||||||||| | ||| || ||||||| |||||| || || ||| | Sbjct 1128287 CCGCCCCAGGACGTCGCCGCCGAGATGAGC-GTGCTCGGCGGCATGCTGCTGTCGAAGGA 1128345 Query 50553 CGCCACCCCGGCCGTCATGGAG---ATTCTCAAGCCCGAGGACTTCTACCGCCCCAACCA 50609 ||||| | ||| |||||| ||| || | | |||| |||||||||||| || Sbjct 1128346 CGCCATCGCGGACGTCATCGAGCAGATCCGCGGCTCCGA---CTTCTACCGCCCGGCGCA 1128402 Query 50610 CGCCACCGTCTACCAGATCATCACCGACCTCTACATGGCCGGTGAGTCCGCCGACGTCAT 50669 || | ||||||| || |||| |||||||||| ||| ||| ||||||||| || Sbjct 1128403 CGAGATCGTCTACGAGTCGATCATCGACCTCTACGGTCGCGGCGAGCCCGCCGACGCGAT 1128462 Query 50670 CACCGTCGCCGCGGAGCT 50687 |||||||| ||||||||| Sbjct 1128463 CACCGTCGTCGCGGAGCT 1128480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242832704951928