Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_028947.1 Length=62738 Score E Sequences producing significant alignments: (Bits) Value seq6 95.1 5e-15 seq2 86.0 3e-12 >seq6 Length=371824 Score = 95.1 bits (104), Expect = 5e-15 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 30773 ACCAGCCGCGTTGGCGCCATTCGTCGAGGCTCGGACGCTCGGCACCCAGAGTGGTGTCGT 30832 ||||||| || | |||||| ||| ||||| ||| ||||||||||| || || |||||| Sbjct 252237 ACCAGCCCCGCTCGCGCCACTCGGCGAGGTGCGGCCGCTCGGCACCGAGCGTCGTGTCGG 252296 Query 30833 CGCCGTGCCCGGGATAGACGACCGTGCGGTCGTCGAAGCGATCAAACACC 30882 ||||||| ||||| ||||| |||| ||||||||| || || || ||| Sbjct 252297 CGCCGTGACCGGGGTAGACCCACGTGGCGTCGTCGAACCGGTCGAAGACC 252346 >seq2 Length=464139 Score = 86.0 bits (94), Expect = 3e-12 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 595 GCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTG 649 || |||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 48408 GCGCAATTGGTAGCGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGAGTCCTG 48462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200613589582588