Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_028952.1 Length=60934 Score E Sequences producing significant alignments: (Bits) Value seq2 116 1e-21 >seq2 Length=464139 Score = 116 bits (128), Expect = 1e-21 Identities = 230/335 (69%), Gaps = 23/335 (7%) Strand=Plus/Minus Query 35869 TCGACCTTGAGACGTCGGGCGTCGACGTCGAGGCCGACCGCATCGTGACCGCCGCGGCGT 35928 ||||| ||||| ||||| |||||||||| | ||||||| |||| ||||||||| Sbjct 130212 TCGACACCGAGACCACGGGCCTCGACGTCGACGTCGACCGCGTCGTCACCGCCGCGCT-- 130155 Query 35929 ACGGGCTCGGCGGCGGCGAGCCGGTCGAGCCTCACGAC------TGGATGCTCGACCCCG 35982 || |||| ||| |||||| || | |||| | ||| | |||||||| | Sbjct 130154 -CGTGCTCCGCG------AGCCGGGCGCCACGCACGTCCGTACGTGGCTCCTCGACCCGG 130102 Query 35983 GCGTCGAGATCCCCGCCGGGGCGACGGCCGTGCACGGCATCACGACGGACGAGGCC-CGC 36041 ||||||||||||| || | ||| |||| | |||||||||||||| | ||||| || Sbjct 130101 GCGTCGAGATCCCGGCGGAGGCCACGGGGATCCACGGCATCACGACCGCGCAGGCCGCGG 130042 Query 36042 GCCAAGGGTGAGCCCGCGCCGGGCGGCATCGATCACATCTCCGACGTCCTCGCCGAGTAC 36101 || |||| | || |||| | || |||| | ||| ||||| |||| || || Sbjct 130041 CGCACGGGTCGGTCCCCGCC-GTCGCGCTCGACGAGATC-GCGACG--CTCGTCGTCGAC 129986 Query 36102 GCC---CGCGCCGGGGTCGCCGTGGTGGGGCACAACGTGCCGTACGACTTCACGCTGCTC 36158 ||| |||| ||| ||| | | || | |||||| ||| |||| || || | ||| Sbjct 129985 GCCCAGCGCGACGGCGTCCCGCTCGTCGCCTACAACGCCGCGTTCGACCTCGCGATCCTC 129926 Query 36159 GACCGCGAGTGCCGCCGGTACGAGCTGCCGACGCT 36193 ||| |||| | ||| ||| |||||||||||| Sbjct 129925 GACACCGAGCTCGTGCGGCACGGGCTGCCGACGCT 129891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194845235056384