Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_028953.1 Length=110764 Score E Sequences producing significant alignments: (Bits) Value seq17 143 2e-29 >seq17 Length=237104 Score = 143 bits (158), Expect = 2e-29 Identities = 211/298 (71%), Gaps = 3/298 (1%) Strand=Plus/Minus Query 97228 CGCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTC 97287 ||| |||| ||||||||| | |||| ||| || ||||||| ||| || ||| || Sbjct 111820 CGCGCCCATGGGCAGGAACAGGGCGTCGCCCTGGCCGATGAGCTTCTCCGCGCCGGGCTG 111761 Query 97288 GTCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCAC 97347 ||| || | || || || | ||| || | || ||||||| ||||| |||||||| Sbjct 111760 GTCGAGCACGACGCGCGAGTCCGCGAGGGACGACGTCGCGAACGCGAGCCGCGACGGCAC 111701 Query 97348 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 97407 ||| | ||||| ||||| || || || || || || || ||||||||||| || || || Sbjct 111700 GTTCGCCTTGATGAGGCCCGTCACGACGTCGACCGACGGGCGCTGCGTCGCGAGCACCAG 111641 Query 97408 ATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTT 97467 || || || || |||||||| ||| | |||||| || ||||||||| || Sbjct 111640 GTGGATGCCCGCCGCGCGCGCGAGCTGCGTGATGCGCTGGATCGAGGCCTCGACGTCGCG 111581 Query 97468 CTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGG 97525 | | || ||||||||||||| ||||| |||||||| || |||| | ||| ||| Sbjct 111580 C---GGGGCGACCATCATGAGGTCGGCGAGCTCGTCGACGACGACCAGCAGGTACGGG 111526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354279010933700