Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_028978.1 Length=60609 Score E Sequences producing significant alignments: (Bits) Value seq6 159 1e-34 >seq6 Length=371824 Score = 159 bits (176), Expect = 1e-34 Identities = 257/363 (71%), Gaps = 15/363 (4%) Strand=Plus/Plus Query 55590 GCGCGCCCGGCTACCCGGCCGAGA-----CGATCGTCGAGACCATCAACGCGCACCACAA 55644 |||||| | | |||||||| || || ||| |||| || | |||| |||||||| Sbjct 98953 GCGCGCGTCGTTCCCCGGCCGCGAGATCGCGTTCGACGAGGCCGTGAACGTCCACCACAA 99012 Query 55645 CTACA-CGCAGAAGGAGCAGCACGGCGGCCGTGATGT-GTGGCTGACCCGCAAGGGCGCG 55702 |||| ||| | | |||| || ||||| || | || | ||||||||||||||||| Sbjct 99013 CTACGTCGCGGTCG-AGCACGTCGACGGCCAGGAGCTCGTCG-TGACCCGCAAGGGCGCG 99070 Query 55703 ATC---GACGCGAACGAGGGTGTGCGGGGCCTGATTCCGGGCTCGATGGGCACCTGTTCG 55759 ||| | || ||| ||| | | || || || ||||| || ||||||||| | ||| Sbjct 99071 ATCCGGGCCGGGAA---GGGCGACCTCGGGCTCATCCCGGGGTCCATGGGCACCGGCTCG 99127 Query 55760 TATGTCGTGACCGGCAAGGGTAATCCCGAGGCGTTGTGCTCAGCGCCGCACGGTGCGGGC 55819 || ||||| ||| || || || ||| ||| || || ||| |||||||||||||| Sbjct 99128 TACATCGTGCGCGGGCTCGGGAACCCGGAGTCGTACTGGTCGGCGTCGCACGGTGCGGGC 99187 Query 55820 CGCCGGTTCTCGCGCACGAAGGCGCGCAAGCTGTTCACGGTCGACGACCTCGAGGCGCGT 55879 || || | ||||||||||||||| ||| |||||| |||||||||||| || | Sbjct 99188 CGTCGCATGTCGCGCACGAAGGCGAAGAAGACCTTCACGCTCGACGACCTCGCCGCCCAG 99247 Query 55880 ATGCAGGGCATCGAGTACCGCAAGGGCGAGGCGTGGGTCGACGAGATTCCCGACGCATAC 55939 | | ||| | |||| |||||||| || | | | |||||||||| || | ||| ||| Sbjct 99248 ACGACCGGCGTGGAGTGCCGCAAGGACGCCGGGGTGCTCGACGAGATCCCGGCCGCCTAC 99307 Query 55940 AAG 55942 ||| Sbjct 99308 AAG 99310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193805352282584