Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_029093.1 Length=75796 Score E Sequences producing significant alignments: (Bits) Value seq17 446 8e-121 seq1 168 3e-37 >seq17 Length=237104 Score = 446 bits (494), Expect = 8e-121 Identities = 580/801 (72%), Gaps = 3/801 (0%) Strand=Plus/Plus Query 65745 GTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTAC 65804 || || ||||| ||||| ||||| ||||| |||||| ||| || |||||||| || Sbjct 124031 GTCGAGGTCATCCCCACGGGCTCCATCGCGCTGGACATCGCGCTCGGCATCGGCGGCCTG 124090 Query 65805 CCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGT 65864 ||| | || || || | || | |||||||| || || || || ||| | || || Sbjct 124091 CCGCGCGGGCGCGTCATCGAGGTGTACGGCCCGGAGTCCTCCGGAAAGACGACCGTGGCG 124150 Query 65865 CTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAG 65924 |||||||| ||||||| || ||| ||||| |||| ||| || | ||||||||| ||| Sbjct 124151 CTCCACGCCGTGGCCAGCGCCCAGCGCGCCGGCGGCATCGCGGCGTTCATCGACGCCGAG 124210 Query 65925 CACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTG 65984 ||| | || ||||| |||||||||||| |||||| || ||| |||| ||| | || Sbjct 124211 CACGCACTCGACCCGGAGTACGCCAAGAAGCTCGGCGTCGACACCGACGCCCTGCTCGTC 124270 Query 65985 GTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGC 66044 ||||||||||| || |||||||| || |||||| ||| | || || || ||| Sbjct 124271 TCCCAGCCGGACACGGGGGAGCAGGCGCTCGAGATCACGGACATGCTGATCCGCTCGGGC 124330 Query 66045 GAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAA 66104 | ||| |||| ||||| | ||||| || |||||||| ||||| || ||| |||| Sbjct 124331 GCGCTCGACATCATCGTCATCGACTCCGTCGCGGCCCTCGTGCCCAAGGCGGAGATCGAG 124390 Query 66105 GGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGC 66164 ||||| || || ||||| |||||||| || || || ||||||||||||||||| ||||| Sbjct 124391 GGCGAGATGGGCGACAGCCACGTCGGTCTCCAGGCCCGCCTCATGTCGCAGGCGCTGCGC 124450 Query 66165 AAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGC 66224 ||| ||||||| | || | || |||| | ||| |||||||| | ||| Sbjct 124451 AAGATCACCGGTGCGCTCAGCGCGTCCGGCACGACCGCCATCTTCATCAACCAGCTCCGC 124510 Query 66225 GAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTG 66284 ||||||||||| |||| || |||| | |||||| || || || |||||||| || Sbjct 124511 GAGAAGATCGG---CGTGTTCTTCGGCTCTCCCGAGACGACGACCGGTGGCAAGGCGCTG 124567 Query 66285 AGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGAT 66344 | |||||||||||| ||||| | || |||| ||||||| ||| ||||| ||| Sbjct 124568 AAGTTCTACGCCTCGGTCCGTCTCGACATCCGCCGCATCGAGACCCTCAAGGAGGGCACC 124627 Query 66345 GAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCAC 66404 || || ||||||||||| ||||| ||||||||||||||||||||| |||| |||||| | Sbjct 124628 GACGCGGTCGGCAACCGGACCCGCGTGAAGGTCGTCAAGAACAAGATGGCGCCGCCGTTC 124687 Query 66405 CGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTC 66464 | ||||||||| | || | ||||||| |||||||| || |||| | ||| || Sbjct 124688 AAGCAGGCCGAGTTCGACATCCTCTACGGGGTCGGCATCTCCCGCGAGGGTGGCCTCATC 124747 Query 66465 GACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGAC 66524 ||| ||| |||| ||| || | ||| ||||| || | ||||||| ||||| | | Sbjct 124748 GACATGGGCGTGGAGCACGGGTTCGTGCGCAAGTCCGGGTCGTGGTTCACCTACGGCGGC 124807 Query 66525 AAGAACGTCGCCCAGGGCAAG 66545 | | ||| ||||||||| Sbjct 124808 GACCAGCTCGGGCAGGGCAAG 124828 >seq1 Length=1297082 Score = 168 bits (186), Expect = 3e-37 Identities = 223/309 (72%), Gaps = 13/309 (4%) Strand=Plus/Plus Query 59145 TCGGCACCCTGACCGCCGACCCCGAGCTGCGGTTCACCCAAGGTGGGCAGGCCGTCGCCA 59204 |||| | ||| || | ||||| |||||||| ||||||| || ||| || |||| Sbjct 1125038 TCGGGAACCTCACGGGAGACCCGGAGCTGCGTTTCACCCCCTCGGGTGCGGCGGTGGCCA 1125097 Query 59205 ACTTCACCGTCGTGTCCAACGAACGCCGCCG-----CGACGCCCAGGGCAAC---TGGGT 59256 ||||||| || | ||||| |||||| | |||| |||| ||| ||| Sbjct 1125098 ACTTCACGGTGGCGTCCA-----CGCCGCGGACCTTCGACCGCCAGTCGAACGAGTGGAA 1125152 Query 59257 CGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTAGC 59316 ||||| ||| || ||| | |||||| | ||||||||||| ||||| |||||||| || Sbjct 1125153 GGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGAGAACGTCGC 1125212 Query 59317 GGAAAGCCTCCAGAAAGGCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCCTT 59376 ||| || ||| ||| ||||||||||||||| ||| |||| |||||||| | Sbjct 1125213 GGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGGGCCGCCTCGTCCAGCGCTCGTA 1125272 Query 59377 CGAGACCAAGGAAGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGCCC 59436 ||||||| || || || |||||||||||| ||||| || |||| ||||||||||| || Sbjct 1125273 CGAGACCCGCGAGGGGGAGAAGCGCACCGTCGTCGAGCTGCAGGTGGACGAGATCGGTCC 1125332 Query 59437 GTCGCTGCG 59445 || ||||| Sbjct 1125333 CTCCCTGCG 1125341 Score = 122 bits (134), Expect = 4e-23 Identities = 148/198 (75%), Gaps = 8/198 (4%) Strand=Plus/Plus Query 49100 CCACCCCAGGACCTAGCCGCCGAG-TCAGCAGTCCTCGGCGCCATGCTTCTCTCCAAGAA 49158 || ||||||||| | ||||||||| | ||| || ||||||| |||||| || || ||| | Sbjct 1128287 CCGCCCCAGGACGTCGCCGCCGAGATGAGC-GTGCTCGGCGGCATGCTGCTGTCGAAGGA 1128345 Query 49159 CGCCACCCCGGCCGTCATGGAG---ATTCTCAAGCCCGAGGACTTCTACCGCCCCAACCA 49215 ||||| | ||| |||||| ||| || | | |||| |||||||||||| || Sbjct 1128346 CGCCATCGCGGACGTCATCGAGCAGATCCGCGGCTCCGA---CTTCTACCGCCCGGCGCA 1128402 Query 49216 CGCCACCGTCTACCAGATCATCACCGACCTCTACATGGCCGGTGAGTCCGCCGACGTCAT 49275 || | ||||||| || |||| |||||||||| ||| ||| ||||||||| || Sbjct 1128403 CGAGATCGTCTACGAGTCGATCATCGACCTCTACGGTCGCGGCGAGCCCGCCGACGCGAT 1128462 Query 49276 CACCGTCGCCGCGGAGCT 49293 |||||||| ||||||||| Sbjct 1128463 CACCGTCGTCGCGGAGCT 1128480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242394355667684