Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq139 102 6e-17
seq56 98.7 7e-16
seq90 84.2 2e-11
>seq139
Length=48224
Score = 102 bits (112), Expect = 6e-17
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||||||||| || |||||||| || ||||| ||| || | || || ||| ||
Sbjct 32484 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 32543
Query 27850 GACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| | | |||| |||||| ||||| ||||| |||||| |||| || |
Sbjct 32544 GACACTATTGACAAC--GTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATC 32601
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| ||| | || ||||||||||| || ||| |||| |||| | | |||||| || ||||
Sbjct 32602 AACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACCTTGTCTGACTACA 32661
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||| || ||| | || ||||| ||| | ||| | || ||
Sbjct 32662 ACATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 32710
>seq56
Length=105907
Score = 98.7 bits (108), Expect = 7e-16
Identities = 162/232 (70%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846
|| ||||||||||| || || ||| | || || || |||||| |||| || |||
Sbjct 95410 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 95351
Query 27847 ACCGACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
| ||| | | ||||| ||||| || || ||||| |||||| |||| |
Sbjct 95350 TCAGACACTATTGACAAT--GTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTG 95293
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964
| || ||| | || || ||||| || || |||||||| |||| | | ||||| || |
Sbjct 95292 ACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACT 95233
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||||||||||| ||| |||||| || ||||||||| | ||| | || ||
Sbjct 95232 ACAACATCCAAAAGGAGTCCACTTTACACTTGGTTTTGAGATTGAGAGGTGG 95181
>seq90
Length=74341
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
|||||||||||| | || || || ||| | || || ||||| || || ||||||||
Sbjct 34384 GACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAA 34443
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|||| | | ||||||||| |||||||| ||||| || |||||| ||||| || |||
Sbjct 34444 GACGGTAGAACCTTGTCCGACTACAACATTCAAAAGGAATCCACTTTACATTTAGTCTTG 34503
Query 28003 CGTTTGCGTGGCGG 28016
| ||| | || ||
Sbjct 34504 AGATTGAGAGGTGG 34517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355821232503084
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |