Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq13 95.1 1e-14 seq6689 86.0 5e-12 >seq13 Length=283376 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 29759 GCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAG 29818 |||||||| || ||||||||||| | |||| | || | ||||||||||||||||||| Sbjct 138873 GCGATGTTGAACGGCACCCCGAGGAAGAGGTCCGCCGAGCGCTGGTAGAGCTGGCACGAG 138814 Query 29819 AGCTCTCCGTCGCTCACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATG 29875 ||| |||||| |||||| ||||| | | || |||||||| || || |||||| Sbjct 138813 AGCCGGCCGTCGGCCACGTAGAACTGGAAGAACGCGTGGCACGGCGGCAGCGCCATG 138757 >seq6689 Length=433 Score = 86.0 bits (94), Expect = 5e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 29759 GCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAG 29818 |||||||| || ||||||||||| | |||| | || | ||||||||||||||||||| Sbjct 232 GCGATGTTGAACGGCACCCCGAGGAAGAGGTCCGCCGAGCGCTGGTAGAGCTGGCACGAG 173 Query 29819 AGCTCTCCGTCGCTCACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATG 29875 ||| |||||| | |||| ||||| | | || ||||||| || || |||||| Sbjct 172 AGCCGGCCGTCGGCCCCGTAGAACTGGAAGAACGCGCGGCACGGCGGCAGCGCCATG 116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406116213517912