Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq312 197 1e-45
seq292 197 1e-45
>seq312
Length=16270
Score = 197 bits (218), Expect = 1e-45
Identities = 562/855 (66%), Gaps = 24/855 (3%)
Strand=Plus/Plus
Query 4240 TTGAACA-AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTG 4298
||| ||| ||||||| |||||||| || || |||| |||||||||||| ||||| ||
Sbjct 936 TTGGACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTA 995
Query 4299 CCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTC 4357
|| | || || || |||||||| ||||| || || || | ||||| | ||| ||
Sbjct 996 CCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTG 1055
Query 4358 ACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTC 4417
|| | ||| || | || || ||| || || || || | || ||| |||| | ||
Sbjct 1056 TTACCGAA-AGCAACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTC 1114
Query 4418 GCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCT---TGTTCTAT 4474
||| || || | || || |||| |||| ||| || | | ||||| ||
Sbjct 1115 AGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTC---CAAGAAGTATCTTTGTTCAAT 1171
Query 4475 AGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTA 4534
|| || || |||| || | || | | || |||||| || || |
Sbjct 1172 TTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATG 1231
Query 4535 TCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTT 4594
| ||||| || || ||||| || ||||||||||||||||| | |||| ||||||
Sbjct 1232 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTT 1291
Query 4595 AGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGA 4654
||||| ||||| |||||||| | |||||||||||| | ||| || || | |||||| ||
Sbjct 1292 GGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGA 1351
Query 4655 CCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCT 4714
|| || || || | ||||| | || |||||| || |||| || || ||| ||
Sbjct 1352 ACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGC 1411
Query 4715 GGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACG---CACGGAAT 4771
| | ||||| ||||||| |||| ||||| | || |||| | || || ||
Sbjct 1412 GTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGC---CTTCTCACCGATTTCTGGGAT 1468
Query 4772 TGTGTATATAGCGTT---AAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTC 4828
|||| || || || || |||| ||||| || | ||||| | || || || ||
Sbjct 1469 GGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTA---GGGTCCTTGATGTAGGTATC 1525
Query 4829 TATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAA 4888
|| | | | || ||||||| || |||||||| || || || || ||||| ||
Sbjct 1526 GATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAA 1585
Query 4889 GCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTAC 4948
| | || |||| | ||| |||||| | | || |||| || |||||||| || ||
Sbjct 1586 ACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAAC 1645
Query 4949 TATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGG 5008
||||||||| || || ||||| || | ||| || || || | ||||
Sbjct 1646 AATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTC 1705
Query 5009 CTTAAGT---TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCA 5065
|| | | || ||||||| | | ||| |||| ||||||| ||||||| | |||||
Sbjct 1706 GTTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCA 1765
Query 5066 AAACGACGCTTCCGC 5080
|| || ||||| ||
Sbjct 1766 GAAAGAAGCTTCGGC 1780
>seq292
Length=18136
Score = 197 bits (218), Expect = 1e-45
Identities = 562/855 (66%), Gaps = 24/855 (3%)
Strand=Plus/Plus
Query 4240 TTGAACA-AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTG 4298
||| ||| ||||||| |||||||| || || |||| |||||||||||| ||||| ||
Sbjct 3069 TTGGACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTA 3128
Query 4299 CCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTC 4357
|| | || || || |||||||| ||||| || || || | ||||| | ||| ||
Sbjct 3129 CCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTG 3188
Query 4358 ACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTC 4417
|| | ||| || | || || ||| || || || || | || ||| |||| | ||
Sbjct 3189 TTACCGAA-AGCAACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTC 3247
Query 4418 GCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCT---TGTTCTAT 4474
||| || || | || || |||| |||| ||| || | | ||||| ||
Sbjct 3248 AGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTC---CAAGAAGTATCTTTGTTCAAT 3304
Query 4475 AGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTA 4534
|| || || |||| || | || | | || |||||| || || |
Sbjct 3305 TTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATG 3364
Query 4535 TCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTT 4594
| ||||| || || ||||| || ||||||||||||||||| | |||| ||||||
Sbjct 3365 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTT 3424
Query 4595 AGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGA 4654
||||| ||||| |||||||| | |||||||||||| | ||| || || | |||||| ||
Sbjct 3425 GGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGA 3484
Query 4655 CCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCT 4714
|| || || || | ||||| | || |||||| || |||| || || ||| ||
Sbjct 3485 ACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGC 3544
Query 4715 GGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACG---CACGGAAT 4771
| | ||||| ||||||| |||| ||||| | || |||| | || || ||
Sbjct 3545 GTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGC---CTTCTCACCGATTTCTGGGAT 3601
Query 4772 TGTGTATATAGCGTT---AAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTC 4828
|||| || || || || |||| ||||| || | ||||| | || || || ||
Sbjct 3602 GGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTA---GGGTCCTTGATGTAGGTATC 3658
Query 4829 TATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAA 4888
|| | | | || ||||||| || |||||||| || || || || ||||| ||
Sbjct 3659 GATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAA 3718
Query 4889 GCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTAC 4948
| | || |||| | ||| |||||| | | || |||| || |||||||| || ||
Sbjct 3719 ACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAAC 3778
Query 4949 TATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGG 5008
||||||||| || || ||||| || | ||| || || || | ||||
Sbjct 3779 AATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTC 3838
Query 5009 CTTAAGT---TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCA 5065
|| | | || ||||||| | | ||| |||| ||||||| ||||||| | |||||
Sbjct 3839 GTTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCA 3898
Query 5066 AAACGACGCTTCCGC 5080
|| || ||||| ||
Sbjct 3899 GAAAGAAGCTTCGGC 3913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427000197300836
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |