Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_030696.1 Length=93139 Score E Sequences producing significant alignments: (Bits) Value seq1 282 3e-71 seq6 118 6e-22 >seq1 Length=1297082 Score = 282 bits (312), Expect = 3e-71 Identities = 269/344 (78%), Gaps = 0/344 (0%) Strand=Plus/Plus Query 71933 TGGCAAACGACACCGTGATCACCGTGATCGGAAATCTGACCGCCGATCCCGAACTGCGCT 71992 ||||| |||||||| ||||| |||||||| || || || | || || || ||||| | Sbjct 1125011 TGGCAGGTGACACCGTCATCACGGTGATCGGGAACCTCACGGGAGACCCGGAGCTGCGTT 1125070 Query 71993 TCACCCCCTCGGGCGCGCCGGTCGCCAACTTCACCGTCGCAAGCACCCCGCGGTACTTCG 72052 ||||||||||||| ||| |||| ||||||||||| || || ||| |||||| ||||| Sbjct 1125071 TCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCCACGCCGCGGACCTTCG 1125130 Query 72053 ACAAGCAGTCCAACGAGTGGAAGGACGCCGAGGCGCTCTTCCTGCGCTGCAACATCTGGC 72112 || ||||| |||||||||||||||| || | || ||| |||||||| ||||||| Sbjct 1125131 ACCGCCAGTCGAACGAGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGC 1125190 Query 72113 GCGAGCCGGCCGAGAACGTCACCGAGTCGCTGTCCAAGGGCATGCGCGTCATCGTCCAGG 72172 ||||| | || ||||||||| | ||||||||| | |||||||||||||||||||| |||| Sbjct 1125191 GCGAGGCCGCGGAGAACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGG 1125250 Query 72173 GTCGCCTCAAGCAGCGCAGCTACGAGACGAAGGAAGGCGAGAACCGGACGGTCATCGAGC 72232 | |||||| |||||| |||||||| || || ||||| || || ||| |||||| Sbjct 1125251 GCCGCCTCGTCCAGCGCTCGTACGAGACCCGCGAGGGGGAGAAGCGCACCGTCGTCGAGC 1125310 Query 72233 TCGAGGTCGAGGAGATCGGCCCCGCACTGCGGTACGCCACCGCC 72276 | |||| || |||||||| ||| | ||||| |||||| | ||| Sbjct 1125311 TGCAGGTGGACGAGATCGGTCCCTCCCTGCGCTACGCCTCTGCC 1125354 >seq6 Length=371824 Score = 118 bits (130), Expect = 6e-22 Identities = 230/329 (70%), Gaps = 18/329 (5%) Strand=Plus/Plus Query 48212 CACCACAACTACACCGAGCGGGTCGAGA---TCGCCGGCAAGAAAGT-GTGGCTCACGCG 48267 |||||||||||| || | |||||| ||| |||| || | | || | | || || Sbjct 99005 CACCACAACTACGTCGCG---GTCGAGCACGTCGACGGCCAGGAGCTCGTCG-TGACCCG 99060 Query 48268 CAAGGGTGCAATCGACGCAAGCGAGGGTCGATAT-GGACTGATCCCCGGATCCATGGGCA 48326 |||||| || ||| || | |||| ||| | || || ||||| || |||||||||| Sbjct 99061 CAAGGGCGCGATCCGGGCCGGGAAGGG-CGACCTCGGGCTCATCCCGGGGTCCATGGGCA 99119 Query 48327 CCAAGTCCTATGTCGTCCGCGGCAAAGGGAAT---GAGTCCGGCCTCTTCTCTGCGCCCC 48383 || || || |||| ||||| ||||| ||||| | | || ||| | | Sbjct 99120 CCGGCTCGTACATCGTGCGCGGGCTCGGGAACCCGGAGTCGTAC---TGGTCGGCGTCGC 99176 Query 48384 ATGGTGCCGGCCGTCAGTAT-TCGCGCACCCAGGCCAAGAAGCTGTTCACCCTGGATGAC 48442 | ||||| ||||||| | || |||||||| |||| |||||| ||||| || || ||| Sbjct 99177 ACGGTGCGGGCCGTC-GCATGTCGCGCACGAAGGCGAAGAAGACCTTCACGCTCGACGAC 99235 Query 48443 CTCGCCGACCGAATGAAGGGCATCGAATACCGCCACGGCGAAGAGTGGATCGACGAGATC 48502 ||||||| || | || ||| | || | |||| | | || | | | ||||||||||| Sbjct 99236 CTCGCCGCCCAGACGACCGGCGTGGAGTGCCGCAAGGACGCCGGGGTGCTCGACGAGATC 99295 Query 48503 CCGGACGCCTACAAGGACATCGACCAGGT 48531 |||| ||||||||||||| ||||| |||| Sbjct 99296 CCGGCCGCCTACAAGGACCTCGACGAGGT 99324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 297885535497200