Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_030696.1
Length=93139
Score E
Sequences producing significant alignments: (Bits) Value
seq1 282 3e-71
seq6 118 6e-22
>seq1
Length=1297082
Score = 282 bits (312), Expect = 3e-71
Identities = 269/344 (78%), Gaps = 0/344 (0%)
Strand=Plus/Plus
Query 71933 TGGCAAACGACACCGTGATCACCGTGATCGGAAATCTGACCGCCGATCCCGAACTGCGCT 71992
||||| |||||||| ||||| |||||||| || || || | || || || ||||| |
Sbjct 1125011 TGGCAGGTGACACCGTCATCACGGTGATCGGGAACCTCACGGGAGACCCGGAGCTGCGTT 1125070
Query 71993 TCACCCCCTCGGGCGCGCCGGTCGCCAACTTCACCGTCGCAAGCACCCCGCGGTACTTCG 72052
||||||||||||| ||| |||| ||||||||||| || || ||| |||||| |||||
Sbjct 1125071 TCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCCACGCCGCGGACCTTCG 1125130
Query 72053 ACAAGCAGTCCAACGAGTGGAAGGACGCCGAGGCGCTCTTCCTGCGCTGCAACATCTGGC 72112
|| ||||| |||||||||||||||| || | || ||| |||||||| |||||||
Sbjct 1125131 ACCGCCAGTCGAACGAGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGC 1125190
Query 72113 GCGAGCCGGCCGAGAACGTCACCGAGTCGCTGTCCAAGGGCATGCGCGTCATCGTCCAGG 72172
||||| | || ||||||||| | ||||||||| | |||||||||||||||||||| ||||
Sbjct 1125191 GCGAGGCCGCGGAGAACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGG 1125250
Query 72173 GTCGCCTCAAGCAGCGCAGCTACGAGACGAAGGAAGGCGAGAACCGGACGGTCATCGAGC 72232
| |||||| |||||| |||||||| || || ||||| || || ||| ||||||
Sbjct 1125251 GCCGCCTCGTCCAGCGCTCGTACGAGACCCGCGAGGGGGAGAAGCGCACCGTCGTCGAGC 1125310
Query 72233 TCGAGGTCGAGGAGATCGGCCCCGCACTGCGGTACGCCACCGCC 72276
| |||| || |||||||| ||| | ||||| |||||| | |||
Sbjct 1125311 TGCAGGTGGACGAGATCGGTCCCTCCCTGCGCTACGCCTCTGCC 1125354
>seq6
Length=371824
Score = 118 bits (130), Expect = 6e-22
Identities = 230/329 (70%), Gaps = 18/329 (5%)
Strand=Plus/Plus
Query 48212 CACCACAACTACACCGAGCGGGTCGAGA---TCGCCGGCAAGAAAGT-GTGGCTCACGCG 48267
|||||||||||| || | |||||| ||| |||| || | | || | | || ||
Sbjct 99005 CACCACAACTACGTCGCG---GTCGAGCACGTCGACGGCCAGGAGCTCGTCG-TGACCCG 99060
Query 48268 CAAGGGTGCAATCGACGCAAGCGAGGGTCGATAT-GGACTGATCCCCGGATCCATGGGCA 48326
|||||| || ||| || | |||| ||| | || || ||||| || ||||||||||
Sbjct 99061 CAAGGGCGCGATCCGGGCCGGGAAGGG-CGACCTCGGGCTCATCCCGGGGTCCATGGGCA 99119
Query 48327 CCAAGTCCTATGTCGTCCGCGGCAAAGGGAAT---GAGTCCGGCCTCTTCTCTGCGCCCC 48383
|| || || |||| ||||| ||||| ||||| | | || ||| | |
Sbjct 99120 CCGGCTCGTACATCGTGCGCGGGCTCGGGAACCCGGAGTCGTAC---TGGTCGGCGTCGC 99176
Query 48384 ATGGTGCCGGCCGTCAGTAT-TCGCGCACCCAGGCCAAGAAGCTGTTCACCCTGGATGAC 48442
| ||||| ||||||| | || |||||||| |||| |||||| ||||| || || |||
Sbjct 99177 ACGGTGCGGGCCGTC-GCATGTCGCGCACGAAGGCGAAGAAGACCTTCACGCTCGACGAC 99235
Query 48443 CTCGCCGACCGAATGAAGGGCATCGAATACCGCCACGGCGAAGAGTGGATCGACGAGATC 48502
||||||| || | || ||| | || | |||| | | || | | | |||||||||||
Sbjct 99236 CTCGCCGCCCAGACGACCGGCGTGGAGTGCCGCAAGGACGCCGGGGTGCTCGACGAGATC 99295
Query 48503 CCGGACGCCTACAAGGACATCGACCAGGT 48531
|||| ||||||||||||| ||||| ||||
Sbjct 99296 CCGGCCGCCTACAAGGACCTCGACGAGGT 99324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 297885535497200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |