Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_030901.1 Length=92618 Score E Sequences producing significant alignments: (Bits) Value seq1 288 6e-73 seq6 98.7 6e-16 >seq1 Length=1297082 Score = 288 bits (318), Expect = 6e-73 Identities = 291/379 (77%), Gaps = 0/379 (0%) Strand=Plus/Plus Query 70870 TGGCAAACGACACCGTGATCACCGTGATCGGAAATCTGACCGCCGATCCCGAACTGCGCT 70929 ||||| |||||||| ||||| |||||||| || || || | || || || ||||| | Sbjct 1125011 TGGCAGGTGACACCGTCATCACGGTGATCGGGAACCTCACGGGAGACCCGGAGCTGCGTT 1125070 Query 70930 TCACCCCCTCGGGCGCGCCGGTCGCCAACTTCACCGTCGCAAGCACCCCGCGGTACTTCG 70989 ||||||||||||| ||| |||| ||||||||||| || || ||| |||||| ||||| Sbjct 1125071 TCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCCACGCCGCGGACCTTCG 1125130 Query 70990 ACAAGCAGTCCAACGAGTGGAAGGACGCCGAGGCGCTCTTCCTGCGCTGCAACATCTGGC 71049 || ||||| |||||||||||||||| || | || ||| |||||||| ||||||| Sbjct 1125131 ACCGCCAGTCGAACGAGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGC 1125190 Query 71050 GCGAGCCGGCCGAGAACGTCACCGAGTCGCTGTCCAAGGGCATGCGCGTCATCGTCCAGG 71109 ||||| | || ||||||||| | ||||||||| | |||||||||||||||||||| |||| Sbjct 1125191 GCGAGGCCGCGGAGAACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGG 1125250 Query 71110 GTCGCCTCAAGCAGCGCAGCTACGAGACGAAGGAAGGCGAGAACCGGACGGTCATCGAGC 71169 | |||||| |||||| |||||||| || || ||||| || || ||| |||||| Sbjct 1125251 GCCGCCTCGTCCAGCGCTCGTACGAGACCCGCGAGGGGGAGAAGCGCACCGTCGTCGAGC 1125310 Query 71170 TCGAGGTCGAGGAGATCGGCCCCGCGCTGCGGTACGCCACCGCCCGCGTGGTCCGAACTC 71229 | |||| || |||||||| ||| | ||||| |||||| | ||| || ||| ||| Sbjct 1125311 TGCAGGTGGACGAGATCGGTCCCTCCCTGCGCTACGCCTCTGCCAAGGTCACCCGCGCTC 1125370 Query 71230 CGCGCAACGGCGGCGGTGG 71248 |||| || |||||||| Sbjct 1125371 AGCGCTCGGGTGGCGGTGG 1125389 >seq6 Length=371824 Score = 98.7 bits (108), Expect = 6e-16 Identities = 226/330 (68%), Gaps = 18/330 (5%) Strand=Plus/Plus Query 47542 CCACCACAACTACACCGAGCGGGTCGAGA---TCGCCGGCAAGAAAGT-GTGGCTCACAC 47597 ||||||||||||| || | |||||| ||| |||| || | | || | | || | Sbjct 99004 CCACCACAACTACGTCGCG---GTCGAGCACGTCGACGGCCAGGAGCTCGTCG-TGACCC 99059 Query 47598 GCAAGGGTGCAATCGACGCAAGCGAGGGTCGATAT-GGACTGATCCCCGGATCCATGGGC 47656 ||||||| || ||| || | |||| ||| | || || ||||| || ||||||||| Sbjct 99060 GCAAGGGCGCGATCCGGGCCGGGAAGGG-CGACCTCGGGCTCATCCCGGGGTCCATGGGC 99118 Query 47657 ACCAAGTCCTATGTCGTCCGCGGCAAAGGGAAT---GAGTCCGGCCTCTTCTCTGCGCCC 47713 ||| || || |||| ||||| ||||| ||||| | | || ||| | Sbjct 99119 ACCGGCTCGTACATCGTGCGCGGGCTCGGGAACCCGGAGTCGTAC---TGGTCGGCGTCG 99175 Query 47714 CATGGTGCCGGCCGTCAGTAT-TCGCGCACCCAGGCCAGGAAGTTGTTCACCCTGGATGA 47772 || ||||| ||||||| | || |||||||| |||| | |||| ||||| || || || Sbjct 99176 CACGGTGCGGGCCGTC-GCATGTCGCGCACGAAGGCGAAGAAGACCTTCACGCTCGACGA 99234 Query 47773 CCTCGCCGACCGAATGAAGGGCATCGAATACCGCCACGGTGAGGAGTGGATTGACGAGAT 47832 |||||||| || | || ||| | || | |||| | | | | | | | |||||||| Sbjct 99235 CCTCGCCGCCCAGACGACCGGCGTGGAGTGCCGCAAGGACGCCGGGGTGCTCGACGAGAT 99294 Query 47833 CCCCGACGCCTACAAGGATATCGACCAGGT 47862 ||| | |||||||||||| ||||| |||| Sbjct 99295 CCCGGCCGCCTACAAGGACCTCGACGAGGT 99324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296218528365148