Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq9491 843 0.0 seq1 250 1e-61 seq6 111 9e-20 seq9489 82.4 5e-11 >seq9491 Length=867449 Score = 843 bits (934), Expect = 0.0 Identities = 757/943 (80%), Gaps = 8/943 (1%) Strand=Plus/Minus Query 78221 GCCATCAACTGGAACAAGGTCACCGACGAGGTCGACGACACCGTGTGGGATCGACTCACC 78280 || |||||||||||| || |||||| ||| | |||||||| || ||| | Sbjct 88535 GCGATCAACTGGAACCGTCTCGAGGACGAGAAGGACCTCGAGGTGTGGGACCGCCTCGTC 88476 Query 78281 GGCAACTTCTGGTTGCCCGAGAAGGTACCGGTGTCCAACGACATCCCATCCTGGGACACC 78340 || ||||||||| |||||||||| || |||||||| |||||||||| || ||| |||| Sbjct 88475 GGGAACTTCTGGCTGCCCGAGAAAGTGCCGGTGTCGAACGACATCCAGTCGTGGAACACG 88416 Query 78341 CTTACGCCGGAAGAGAAGGAACTCACTATGCGTGTGTTCACCGGCCTCACCCTGCTCGAC 78400 || || || | ||| |||| ||||| ||||| || ||||||||||| || ||||| ||| Sbjct 88415 CTCACCGCGCAGGAGCAGGAGCTCACGATGCGCGTATTCACCGGCCTGACGCTGCTGGAC 88356 Query 78401 ACCATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCCGACGCCAACACCCCGCACGAG 78460 || ||||||||||| || ||||| | ||||||||| ||||||| | ||| ||||||||| Sbjct 88355 ACGATCCAGGGCACGGTCGGCGCGGTGTCGCTCATCCCCGACGCGATCACGCCGCACGAG 88296 Query 78461 GAGGCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTACACGCCAAGTCCTACAGCTCG 78520 || |||||| ||||||||||||||||||||||||||| ||||||||| |||| ||| Sbjct 88295 GAAGCGGTGTACACCAACATCGCGTTCATGGAGTCGGTGCACGCCAAGAGCTACTCGTCG 88236 Query 78521 ATCTTCTCAACGCTATGCTCCTCCAAGCAGATTGACGAGGCGTTCCGTTGGTCGGAGGAG 78580 |||||||| ||||| |||||| | |||| ||||| |||||||| |||||||||||| Sbjct 88235 ATCTTCTCGACGCTGTGCTCCACTCGTGAGATCGACGACGCGTTCCGCTGGTCGGAGGAG 88176 Query 78581 AACGAGTACCTGCAGCGCAAGGCCCAGATCGTCCTGGACTACTACCGCGGCGACGACCCC 78640 ||| | |||| |||||||||||| |||||||| ||||||||||| |||||| || Sbjct 88175 AACCCGAACCTCCAGCGCAAGGCCGAGATCGTCATGGACTACTACAAGGGCGACTCGCCG 88116 Query 78641 TTGAAGCGGAAGGTGGCCAGTACGCTCCTGGAGGGCTTCCTCTTCTACTCGGGCTTCTAC 78700 | ||||| ||||| || || ||||| || ||| |||||||||||||| ||||||||| Sbjct 88115 CTCAAGCGCAAGGTCGCGAGCACGCTGCTCGAGTCATTCCTCTTCTACTCCGGCTTCTAC 88056 Query 78701 CTGCCGATGTACTGGTCGAGCCGCGCCAAGCTGACGAACACCGCGGACGTGATCCGGTTG 78760 |||||||||||||||||| |||||||||||||||||||| || ||| | ||||| | Sbjct 88055 CTGCCGATGTACTGGTCGTCGCGCGCCAAGCTGACGAACACGGCCGACCTCATCCGCCTC 87996 Query 78761 ATTATCCGAGACGAAGCAGTTCATGGGTACTACATCGGATACAAGTACCAGCGAGGCCTC 78820 || ||||| ||||| || || || |||||||||||||| ||||||| |||| || ||| Sbjct 87995 ATCATCCGCGACGAGGCCGTGCACGGGTACTACATCGGCTACAAGTTCCAGAAGGGTCTC 87936 Query 78821 GAGACCCAGGGGCCGGCGCGGCAGGCTGAGCTCAAGGAGTACACGTTCGATCTGCTCTCG 78880 |||| | |||| | || | |||||||||| |||||||||||| ||||||| Sbjct 87935 GAGAAGCTCTCCCCGGAGGAGCGCGACGAGCTCAAGGCGTACACGTTCGAGCTGCTCTTC 87876 Query 78881 GAGCTCTACGACAACGAGTGTG-ACTACACCGAGCAGCTCTATGACGACGTCGGACTCAC 78939 ||||| ||||| |||||| ||| | ||||| ||| | ||||| |||| |||||| || || Sbjct 87875 GAGCTGTACGAGAACGAG-GTGCAGTACACGGAGGACCTCTACGACGGCGTCGGGCTGAC 87817 Query 78940 CGAGGATGTCAAGAAGTTCCTGCGCTACAACGGCAACAAGGCGCTGATGAACCTCGGCTA 78999 |||||| ||||||||||||||||| ||||||| |||||||||||| |||||||||||||| Sbjct 87816 CGAGGACGTCAAGAAGTTCCTGCGGTACAACGCCAACAAGGCGCTCATGAACCTCGGCTA 87757 Query 79000 CGAAGCACTGTTCCCCAAGGAAGAGACC-ATGGCAGACCCGGCCATCATGTCCGCGCTCT 79058 ||| || || ||||||||||| |||||| | | || ||||||| ||| | || ||||| | Sbjct 87756 CGAGGCGCTCTTCCCCAAGGACGAGACCGACGTCA-ACCCGGCGATCCTCTCGGCGCTGT 87698 Query 79059 CACCAGGCGGCGACGAGAACCACGACTTCTTCTCCGGGTCGGGCTCGAGCTACGTCATCG 79118 | || || |||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct 87697 CGCCGAACGCCGACGAGAACCACGACTTCTTCTCCGGGTCCGGCTCGTCGTACGTCATCG 87638 Query 79119 GCAAAGC--TGAAGCCACGGCAGATGAGGACTGGGACTTCTGA 79159 |||| || |||| ||| | || || ||||||||||||||| Sbjct 87637 GCAAGGCCGTGAA--CACCGAGGACGACGACTGGGACTTCTGA 87597 >seq1 Length=1297082 Score = 250 bits (276), Expect = 1e-61 Identities = 268/354 (76%), Gaps = 3/354 (1%) Strand=Plus/Plus Query 69624 ATGGCAAATGACACCGTCATCACCGTCATCGGTAACCTGACCGCCGACCCCGAACTCCGG 69683 |||||| ||||||||||||||| || ||||| ||||| || | ||||| || || || Sbjct 1125010 ATGGCAGGTGACACCGTCATCACGGTGATCGGGAACCTCACGGGAGACCCGGAGCTGCGT 1125069 Query 69684 TTCACGCCCTCCGGTGCCGCGGTCGCGAACTTCACCGTCGCGTCGACCCCGCGGTACTTC 69743 ||||| ||||| ||||| ||||| || |||||||| || ||||| || |||||| |||| Sbjct 1125070 TTCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCCACGCCGCGGACCTTC 1125129 Query 69744 GACAAGCAGTCGAACGAGTGGAAGGATGCCGAGGCACTCTTCCTGCGCTGCAACGTCTGG 69803 ||| |||||||||||||||||||| | || | || ||| |||||||| ||||| Sbjct 1125130 GACCGCCAGTCGAACGAGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGG 1125189 Query 69804 CGCGAGTACGCCGAGAACGTGACTGAGTCGCTCCAGAAGGGCGCCCGCGTCATCGTCCAG 69863 |||||| ||| |||||||| | |||||||| ||||||| ||||||||||| ||| Sbjct 1125190 CGCGAGGCCGCGGAGAACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAG 1125249 Query 69864 GGCAAGCTCAAGCAGCGGTCCTACGAGA---AGGATGGCCAGCCGCGCACCACCTTCGAG 69920 ||| ||| ||||| || ||||||| || || || ||||||| | ||||| Sbjct 1125250 GGCCGCCTCGTCCAGCGCTCGTACGAGACCCGCGAGGGGGAGAAGCGCACCGTCGTCGAG 1125309 Query 69921 CTCGAGGTTGAGGAGATCGGCCCCGCACTCCGGTACGCCACCGCCCGGGTCACC 69974 || |||| || |||||||| ||| | || || |||||| | ||| ||||||| Sbjct 1125310 CTGCAGGTGGACGAGATCGGTCCCTCCCTGCGCTACGCCTCTGCCAAGGTCACC 1125363 >seq6 Length=371824 Score = 111 bits (122), Expect = 9e-20 Identities = 181/258 (70%), Gaps = 6/258 (2%) Strand=Plus/Plus Query 46083 ACTCGCAAGGGAGCGATCGACGCTTCGGCGGGCCGCTACGGACTCATCCCCGGATCCATG 46142 || |||||||| |||||| || | |||| | ||| |||||||| || |||||| Sbjct 99056 ACCCGCAAGGGCGCGATCCGGGCCGGGAAGGGCGACCTCGGGCTCATCCCGGGGTCCATG 99115 Query 46143 GGCACCAAGTCCTACGTGGTCTGTGGCAAGGGCAAC---GAGTCCGGCCTGAAGTCAGCA 46199 |||||| || ||| | || | || || ||| ||||| | ||| ||| || Sbjct 99116 GGCACCGGCTCGTACATCGTGCGCGGGCTCGGGAACCCGGAGTC-GTACTG--GTCGGCG 99172 Query 46200 CCCCATGGTGCGGGGCGTCGGTTCTCGCGCACGAAGGCCAAGCAGTTGTTCACCCTCGAT 46259 | || |||||||| ||||| | |||||||||||||| ||| || ||||| ||||| Sbjct 99173 TCGCACGGTGCGGGCCGTCGCATGTCGCGCACGAAGGCGAAGAAGACCTTCACGCTCGAC 99232 Query 46260 GACCTCGCCGACCGCATGCAGGGCATCGAGTACCGACATGGTGCCGAGTGGATCGATGAG 46319 |||||||||| || | | ||| | |||| ||| | | |||| | | |||| ||| Sbjct 99233 GACCTCGCCGCCCAGACGACCGGCGTGGAGTGCCGCAAGGACGCCGGGGTGCTCGACGAG 99292 Query 46320 ATCCCCGACGCCTACAAG 46337 ||||| | |||||||||| Sbjct 99293 ATCCCGGCCGCCTACAAG 99310 >seq9489 Length=379987 Score = 82.4 bits (90), Expect = 5e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 5356 CGTAGCTCAATTGGCAGAGCGTCCGACTGTTAATCGGATGGTTGAAGGTTCGAGTCCTTC 5415 ||||||||| ||||||||| ||||||||||||||||| ||| | |||||| |||||| | Sbjct 277978 CGTAGCTCAGCTGGCAGAGCATCCGACTGTTAATCGGACGGTCGTAGGTTCAAGTCCTAC 277919 Query 5416 CGTCGGAGCCATC 5428 || |||||| || Sbjct 277918 CGCGGGAGCCCTC 277906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299286973354856