Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_030917.1
Length=93577
Score E
Sequences producing significant alignments: (Bits) Value
seq9491 843 0.0
seq1 250 1e-61
seq6 111 9e-20
seq9489 82.4 5e-11
>seq9491
Length=867449
Score = 843 bits (934), Expect = 0.0
Identities = 757/943 (80%), Gaps = 8/943 (1%)
Strand=Plus/Minus
Query 78221 GCCATCAACTGGAACAAGGTCACCGACGAGGTCGACGACACCGTGTGGGATCGACTCACC 78280
|| |||||||||||| || |||||| ||| | |||||||| || ||| |
Sbjct 88535 GCGATCAACTGGAACCGTCTCGAGGACGAGAAGGACCTCGAGGTGTGGGACCGCCTCGTC 88476
Query 78281 GGCAACTTCTGGTTGCCCGAGAAGGTACCGGTGTCCAACGACATCCCATCCTGGGACACC 78340
|| ||||||||| |||||||||| || |||||||| |||||||||| || ||| ||||
Sbjct 88475 GGGAACTTCTGGCTGCCCGAGAAAGTGCCGGTGTCGAACGACATCCAGTCGTGGAACACG 88416
Query 78341 CTTACGCCGGAAGAGAAGGAACTCACTATGCGTGTGTTCACCGGCCTCACCCTGCTCGAC 78400
|| || || | ||| |||| ||||| ||||| || ||||||||||| || ||||| |||
Sbjct 88415 CTCACCGCGCAGGAGCAGGAGCTCACGATGCGCGTATTCACCGGCCTGACGCTGCTGGAC 88356
Query 78401 ACCATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCCGACGCCAACACCCCGCACGAG 78460
|| ||||||||||| || ||||| | ||||||||| ||||||| | ||| |||||||||
Sbjct 88355 ACGATCCAGGGCACGGTCGGCGCGGTGTCGCTCATCCCCGACGCGATCACGCCGCACGAG 88296
Query 78461 GAGGCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTACACGCCAAGTCCTACAGCTCG 78520
|| |||||| ||||||||||||||||||||||||||| ||||||||| |||| |||
Sbjct 88295 GAAGCGGTGTACACCAACATCGCGTTCATGGAGTCGGTGCACGCCAAGAGCTACTCGTCG 88236
Query 78521 ATCTTCTCAACGCTATGCTCCTCCAAGCAGATTGACGAGGCGTTCCGTTGGTCGGAGGAG 78580
|||||||| ||||| |||||| | |||| ||||| |||||||| ||||||||||||
Sbjct 88235 ATCTTCTCGACGCTGTGCTCCACTCGTGAGATCGACGACGCGTTCCGCTGGTCGGAGGAG 88176
Query 78581 AACGAGTACCTGCAGCGCAAGGCCCAGATCGTCCTGGACTACTACCGCGGCGACGACCCC 78640
||| | |||| |||||||||||| |||||||| ||||||||||| |||||| ||
Sbjct 88175 AACCCGAACCTCCAGCGCAAGGCCGAGATCGTCATGGACTACTACAAGGGCGACTCGCCG 88116
Query 78641 TTGAAGCGGAAGGTGGCCAGTACGCTCCTGGAGGGCTTCCTCTTCTACTCGGGCTTCTAC 78700
| ||||| ||||| || || ||||| || ||| |||||||||||||| |||||||||
Sbjct 88115 CTCAAGCGCAAGGTCGCGAGCACGCTGCTCGAGTCATTCCTCTTCTACTCCGGCTTCTAC 88056
Query 78701 CTGCCGATGTACTGGTCGAGCCGCGCCAAGCTGACGAACACCGCGGACGTGATCCGGTTG 78760
|||||||||||||||||| |||||||||||||||||||| || ||| | ||||| |
Sbjct 88055 CTGCCGATGTACTGGTCGTCGCGCGCCAAGCTGACGAACACGGCCGACCTCATCCGCCTC 87996
Query 78761 ATTATCCGAGACGAAGCAGTTCATGGGTACTACATCGGATACAAGTACCAGCGAGGCCTC 78820
|| ||||| ||||| || || || |||||||||||||| ||||||| |||| || |||
Sbjct 87995 ATCATCCGCGACGAGGCCGTGCACGGGTACTACATCGGCTACAAGTTCCAGAAGGGTCTC 87936
Query 78821 GAGACCCAGGGGCCGGCGCGGCAGGCTGAGCTCAAGGAGTACACGTTCGATCTGCTCTCG 78880
|||| | |||| | || | |||||||||| |||||||||||| |||||||
Sbjct 87935 GAGAAGCTCTCCCCGGAGGAGCGCGACGAGCTCAAGGCGTACACGTTCGAGCTGCTCTTC 87876
Query 78881 GAGCTCTACGACAACGAGTGTG-ACTACACCGAGCAGCTCTATGACGACGTCGGACTCAC 78939
||||| ||||| |||||| ||| | ||||| ||| | ||||| |||| |||||| || ||
Sbjct 87875 GAGCTGTACGAGAACGAG-GTGCAGTACACGGAGGACCTCTACGACGGCGTCGGGCTGAC 87817
Query 78940 CGAGGATGTCAAGAAGTTCCTGCGCTACAACGGCAACAAGGCGCTGATGAACCTCGGCTA 78999
|||||| ||||||||||||||||| ||||||| |||||||||||| ||||||||||||||
Sbjct 87816 CGAGGACGTCAAGAAGTTCCTGCGGTACAACGCCAACAAGGCGCTCATGAACCTCGGCTA 87757
Query 79000 CGAAGCACTGTTCCCCAAGGAAGAGACC-ATGGCAGACCCGGCCATCATGTCCGCGCTCT 79058
||| || || ||||||||||| |||||| | | || ||||||| ||| | || ||||| |
Sbjct 87756 CGAGGCGCTCTTCCCCAAGGACGAGACCGACGTCA-ACCCGGCGATCCTCTCGGCGCTGT 87698
Query 79059 CACCAGGCGGCGACGAGAACCACGACTTCTTCTCCGGGTCGGGCTCGAGCTACGTCATCG 79118
| || || |||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct 87697 CGCCGAACGCCGACGAGAACCACGACTTCTTCTCCGGGTCCGGCTCGTCGTACGTCATCG 87638
Query 79119 GCAAAGC--TGAAGCCACGGCAGATGAGGACTGGGACTTCTGA 79159
|||| || |||| ||| | || || |||||||||||||||
Sbjct 87637 GCAAGGCCGTGAA--CACCGAGGACGACGACTGGGACTTCTGA 87597
>seq1
Length=1297082
Score = 250 bits (276), Expect = 1e-61
Identities = 268/354 (76%), Gaps = 3/354 (1%)
Strand=Plus/Plus
Query 69624 ATGGCAAATGACACCGTCATCACCGTCATCGGTAACCTGACCGCCGACCCCGAACTCCGG 69683
|||||| ||||||||||||||| || ||||| ||||| || | ||||| || || ||
Sbjct 1125010 ATGGCAGGTGACACCGTCATCACGGTGATCGGGAACCTCACGGGAGACCCGGAGCTGCGT 1125069
Query 69684 TTCACGCCCTCCGGTGCCGCGGTCGCGAACTTCACCGTCGCGTCGACCCCGCGGTACTTC 69743
||||| ||||| ||||| ||||| || |||||||| || ||||| || |||||| ||||
Sbjct 1125070 TTCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCCACGCCGCGGACCTTC 1125129
Query 69744 GACAAGCAGTCGAACGAGTGGAAGGATGCCGAGGCACTCTTCCTGCGCTGCAACGTCTGG 69803
||| |||||||||||||||||||| | || | || ||| |||||||| |||||
Sbjct 1125130 GACCGCCAGTCGAACGAGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGG 1125189
Query 69804 CGCGAGTACGCCGAGAACGTGACTGAGTCGCTCCAGAAGGGCGCCCGCGTCATCGTCCAG 69863
|||||| ||| |||||||| | |||||||| ||||||| ||||||||||| |||
Sbjct 1125190 CGCGAGGCCGCGGAGAACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAG 1125249
Query 69864 GGCAAGCTCAAGCAGCGGTCCTACGAGA---AGGATGGCCAGCCGCGCACCACCTTCGAG 69920
||| ||| ||||| || ||||||| || || || ||||||| | |||||
Sbjct 1125250 GGCCGCCTCGTCCAGCGCTCGTACGAGACCCGCGAGGGGGAGAAGCGCACCGTCGTCGAG 1125309
Query 69921 CTCGAGGTTGAGGAGATCGGCCCCGCACTCCGGTACGCCACCGCCCGGGTCACC 69974
|| |||| || |||||||| ||| | || || |||||| | ||| |||||||
Sbjct 1125310 CTGCAGGTGGACGAGATCGGTCCCTCCCTGCGCTACGCCTCTGCCAAGGTCACC 1125363
>seq6
Length=371824
Score = 111 bits (122), Expect = 9e-20
Identities = 181/258 (70%), Gaps = 6/258 (2%)
Strand=Plus/Plus
Query 46083 ACTCGCAAGGGAGCGATCGACGCTTCGGCGGGCCGCTACGGACTCATCCCCGGATCCATG 46142
|| |||||||| |||||| || | |||| | ||| |||||||| || ||||||
Sbjct 99056 ACCCGCAAGGGCGCGATCCGGGCCGGGAAGGGCGACCTCGGGCTCATCCCGGGGTCCATG 99115
Query 46143 GGCACCAAGTCCTACGTGGTCTGTGGCAAGGGCAAC---GAGTCCGGCCTGAAGTCAGCA 46199
|||||| || ||| | || | || || ||| ||||| | ||| ||| ||
Sbjct 99116 GGCACCGGCTCGTACATCGTGCGCGGGCTCGGGAACCCGGAGTC-GTACTG--GTCGGCG 99172
Query 46200 CCCCATGGTGCGGGGCGTCGGTTCTCGCGCACGAAGGCCAAGCAGTTGTTCACCCTCGAT 46259
| || |||||||| ||||| | |||||||||||||| ||| || ||||| |||||
Sbjct 99173 TCGCACGGTGCGGGCCGTCGCATGTCGCGCACGAAGGCGAAGAAGACCTTCACGCTCGAC 99232
Query 46260 GACCTCGCCGACCGCATGCAGGGCATCGAGTACCGACATGGTGCCGAGTGGATCGATGAG 46319
|||||||||| || | | ||| | |||| ||| | | |||| | | |||| |||
Sbjct 99233 GACCTCGCCGCCCAGACGACCGGCGTGGAGTGCCGCAAGGACGCCGGGGTGCTCGACGAG 99292
Query 46320 ATCCCCGACGCCTACAAG 46337
||||| | ||||||||||
Sbjct 99293 ATCCCGGCCGCCTACAAG 99310
>seq9489
Length=379987
Score = 82.4 bits (90), Expect = 5e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 5356 CGTAGCTCAATTGGCAGAGCGTCCGACTGTTAATCGGATGGTTGAAGGTTCGAGTCCTTC 5415
||||||||| ||||||||| ||||||||||||||||| ||| | |||||| |||||| |
Sbjct 277978 CGTAGCTCAGCTGGCAGAGCATCCGACTGTTAATCGGACGGTCGTAGGTTCAAGTCCTAC 277919
Query 5416 CGTCGGAGCCATC 5428
|| |||||| ||
Sbjct 277918 CGCGGGAGCCCTC 277906
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 299286973354856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |