Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_030936.1 Length=93843 Score E Sequences producing significant alignments: (Bits) Value seq1 291 5e-74 seq6 114 8e-21 >seq1 Length=1297082 Score = 291 bits (322), Expect = 5e-74 Identities = 292/379 (77%), Gaps = 0/379 (0%) Strand=Plus/Plus Query 72299 TGGCAAACGACACCGTGATCACCGTGATCGGAAACCTGACCGCCGATCCCGAACTGCGCT 72358 ||||| |||||||| ||||| |||||||| ||||| || | || || || ||||| | Sbjct 1125011 TGGCAGGTGACACCGTCATCACGGTGATCGGGAACCTCACGGGAGACCCGGAGCTGCGTT 1125070 Query 72359 TCACCCCCTCGGGTGCGCCGGTCGCCAACTTCACCGTCGCAAGCACCCCCCGGTACTTCG 72418 ||||||||||||||||| |||| ||||||||||| || || ||| || ||| ||||| Sbjct 1125071 TCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCCACGCCGCGGACCTTCG 1125130 Query 72419 ACAAGCAGAGCAACGAGTGGAAGGACGCCGAGGCGCTCTTCCTGCGCTGCAACATCTGGC 72478 || ||| |||||||||||||||| || | || ||| |||||||| ||||||| Sbjct 1125131 ACCGCCAGTCGAACGAGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGC 1125190 Query 72479 GCGAGCCGGCCGAGAACGTCGCCGAGTCGCTGACCAAGGGCATGCGCGTCATCGTCCAGG 72538 ||||| | || ||||||||||| ||||||||||| |||||||||||||||||||| |||| Sbjct 1125191 GCGAGGCCGCGGAGAACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGG 1125250 Query 72539 GACGCCTCAAGCAGCGCAGCTACGAGACGAAGGAAGGCGAGAACCGGACGGTCATCGAGC 72598 | |||||| |||||| |||||||| || || ||||| || || ||| |||||| Sbjct 1125251 GCCGCCTCGTCCAGCGCTCGTACGAGACCCGCGAGGGGGAGAAGCGCACCGTCGTCGAGC 1125310 Query 72599 TCGAGGTCGAGGAGATCGGCCCCGCGCTGCGGTACGCCACCGCCCGCGTGGTCCGAACTC 72658 | |||| || |||||||| ||| | ||||| |||||| | ||| || ||| ||| Sbjct 1125311 TGCAGGTGGACGAGATCGGTCCCTCCCTGCGCTACGCCTCTGCCAAGGTCACCCGCGCTC 1125370 Query 72659 CGCGCAACGGCGGCGGTGG 72677 |||| || |||||||| Sbjct 1125371 AGCGCTCGGGTGGCGGTGG 1125389 >seq6 Length=371824 Score = 114 bits (126), Expect = 8e-21 Identities = 229/329 (70%), Gaps = 18/329 (5%) Strand=Plus/Plus Query 48401 CACCACAACTACACCGAGCGGGTCGAGA---TCGCCGGCAAGAAAGT-GTGGCTCACGCG 48456 |||||||||||| || | |||||| ||| |||| || | | || | | || || Sbjct 99005 CACCACAACTACGTCGCG---GTCGAGCACGTCGACGGCCAGGAGCTCGTCG-TGACCCG 99060 Query 48457 CAAGGGTGCAATCGACGCAAGCGAGGGTCGATAT-GGACTGATCCCCGGATCCATGGGCA 48515 |||||| || ||| || | |||| ||| | || || ||||| || |||||||||| Sbjct 99061 CAAGGGCGCGATCCGGGCCGGGAAGGG-CGACCTCGGGCTCATCCCGGGGTCCATGGGCA 99119 Query 48516 CCAAGTCCTATGTCGTCCGCGGCAAAGGGAAT---GAGTCCGGCCTCTTCTCTGCGCCCC 48572 || || || |||| ||||| ||||| ||||| | | || ||| | | Sbjct 99120 CCGGCTCGTACATCGTGCGCGGGCTCGGGAACCCGGAGTCGTAC---TGGTCGGCGTCGC 99176 Query 48573 ATGGTGCCGGTCGTCAGTAT-TCGCGCACCCAGGCCAAGAAGCTGTTCACCCTGGATGAC 48631 | ||||| || |||| | || |||||||| |||| |||||| ||||| || || ||| Sbjct 99177 ACGGTGCGGGCCGTC-GCATGTCGCGCACGAAGGCGAAGAAGACCTTCACGCTCGACGAC 99235 Query 48632 CTCGCCGACCGAATGAAGGGCATCGAATACCGCCACGGCGAAGAGTGGATCGACGAGATC 48691 ||||||| || | || ||| | || | |||| | | || | | | ||||||||||| Sbjct 99236 CTCGCCGCCCAGACGACCGGCGTGGAGTGCCGCAAGGACGCCGGGGTGCTCGACGAGATC 99295 Query 48692 CCGGACGCCTACAAGGACATCGACCAGGT 48720 |||| ||||||||||||| ||||| |||| Sbjct 99296 CCGGCCGCCTACAAGGACCTCGACGAGGT 99324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300138074884848