Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_030936.1
Length=93843
Score E
Sequences producing significant alignments: (Bits) Value
seq1 291 5e-74
seq6 114 8e-21
>seq1
Length=1297082
Score = 291 bits (322), Expect = 5e-74
Identities = 292/379 (77%), Gaps = 0/379 (0%)
Strand=Plus/Plus
Query 72299 TGGCAAACGACACCGTGATCACCGTGATCGGAAACCTGACCGCCGATCCCGAACTGCGCT 72358
||||| |||||||| ||||| |||||||| ||||| || | || || || ||||| |
Sbjct 1125011 TGGCAGGTGACACCGTCATCACGGTGATCGGGAACCTCACGGGAGACCCGGAGCTGCGTT 1125070
Query 72359 TCACCCCCTCGGGTGCGCCGGTCGCCAACTTCACCGTCGCAAGCACCCCCCGGTACTTCG 72418
||||||||||||||||| |||| ||||||||||| || || ||| || ||| |||||
Sbjct 1125071 TCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCCACGCCGCGGACCTTCG 1125130
Query 72419 ACAAGCAGAGCAACGAGTGGAAGGACGCCGAGGCGCTCTTCCTGCGCTGCAACATCTGGC 72478
|| ||| |||||||||||||||| || | || ||| |||||||| |||||||
Sbjct 1125131 ACCGCCAGTCGAACGAGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGC 1125190
Query 72479 GCGAGCCGGCCGAGAACGTCGCCGAGTCGCTGACCAAGGGCATGCGCGTCATCGTCCAGG 72538
||||| | || ||||||||||| ||||||||||| |||||||||||||||||||| ||||
Sbjct 1125191 GCGAGGCCGCGGAGAACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGG 1125250
Query 72539 GACGCCTCAAGCAGCGCAGCTACGAGACGAAGGAAGGCGAGAACCGGACGGTCATCGAGC 72598
| |||||| |||||| |||||||| || || ||||| || || ||| ||||||
Sbjct 1125251 GCCGCCTCGTCCAGCGCTCGTACGAGACCCGCGAGGGGGAGAAGCGCACCGTCGTCGAGC 1125310
Query 72599 TCGAGGTCGAGGAGATCGGCCCCGCGCTGCGGTACGCCACCGCCCGCGTGGTCCGAACTC 72658
| |||| || |||||||| ||| | ||||| |||||| | ||| || ||| |||
Sbjct 1125311 TGCAGGTGGACGAGATCGGTCCCTCCCTGCGCTACGCCTCTGCCAAGGTCACCCGCGCTC 1125370
Query 72659 CGCGCAACGGCGGCGGTGG 72677
|||| || ||||||||
Sbjct 1125371 AGCGCTCGGGTGGCGGTGG 1125389
>seq6
Length=371824
Score = 114 bits (126), Expect = 8e-21
Identities = 229/329 (70%), Gaps = 18/329 (5%)
Strand=Plus/Plus
Query 48401 CACCACAACTACACCGAGCGGGTCGAGA---TCGCCGGCAAGAAAGT-GTGGCTCACGCG 48456
|||||||||||| || | |||||| ||| |||| || | | || | | || ||
Sbjct 99005 CACCACAACTACGTCGCG---GTCGAGCACGTCGACGGCCAGGAGCTCGTCG-TGACCCG 99060
Query 48457 CAAGGGTGCAATCGACGCAAGCGAGGGTCGATAT-GGACTGATCCCCGGATCCATGGGCA 48515
|||||| || ||| || | |||| ||| | || || ||||| || ||||||||||
Sbjct 99061 CAAGGGCGCGATCCGGGCCGGGAAGGG-CGACCTCGGGCTCATCCCGGGGTCCATGGGCA 99119
Query 48516 CCAAGTCCTATGTCGTCCGCGGCAAAGGGAAT---GAGTCCGGCCTCTTCTCTGCGCCCC 48572
|| || || |||| ||||| ||||| ||||| | | || ||| | |
Sbjct 99120 CCGGCTCGTACATCGTGCGCGGGCTCGGGAACCCGGAGTCGTAC---TGGTCGGCGTCGC 99176
Query 48573 ATGGTGCCGGTCGTCAGTAT-TCGCGCACCCAGGCCAAGAAGCTGTTCACCCTGGATGAC 48631
| ||||| || |||| | || |||||||| |||| |||||| ||||| || || |||
Sbjct 99177 ACGGTGCGGGCCGTC-GCATGTCGCGCACGAAGGCGAAGAAGACCTTCACGCTCGACGAC 99235
Query 48632 CTCGCCGACCGAATGAAGGGCATCGAATACCGCCACGGCGAAGAGTGGATCGACGAGATC 48691
||||||| || | || ||| | || | |||| | | || | | | |||||||||||
Sbjct 99236 CTCGCCGCCCAGACGACCGGCGTGGAGTGCCGCAAGGACGCCGGGGTGCTCGACGAGATC 99295
Query 48692 CCGGACGCCTACAAGGACATCGACCAGGT 48720
|||| ||||||||||||| ||||| ||||
Sbjct 99296 CCGGCCGCCTACAAGGACCTCGACGAGGT 99324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300138074884848
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |