Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_031029.1
Length=93686
Score E
Sequences producing significant alignments: (Bits) Value
seq1 297 1e-75
seq6 118 6e-22
>seq1
Length=1297082
Score = 297 bits (328), Expect = 1e-75
Identities = 293/379 (77%), Gaps = 0/379 (0%)
Strand=Plus/Plus
Query 72612 TGGCAAACGACACCGTGATCACCGTGATCGGAAACCTGACCGCCGATCCCGAACTGCGCT 72671
||||| |||||||| ||||| |||||||| ||||| || | || || || ||||| |
Sbjct 1125011 TGGCAGGTGACACCGTCATCACGGTGATCGGGAACCTCACGGGAGACCCGGAGCTGCGTT 1125070
Query 72672 TCACCCCCTCGGGTGCGCCGGTCGCCAACTTCACCGTCGCAAGCACCCCGCGGTACTTCG 72731
||||||||||||||||| |||| ||||||||||| || || ||| |||||| |||||
Sbjct 1125071 TCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCCACGCCGCGGACCTTCG 1125130
Query 72732 ACAAGCAGTCCAACGAGTGGAAGGACGCCGAGGCGCTCTTCCTGCGCTGCAACATCTGGC 72791
|| ||||| |||||||||||||||| || | || ||| |||||||| |||||||
Sbjct 1125131 ACCGCCAGTCGAACGAGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGC 1125190
Query 72792 GCGAGCCGGCCGAGAACGTCACCGAGTCGCTGTCCAAGGGCATGCGCGTCATCGTCCAGG 72851
||||| | || ||||||||| | ||||||||| | |||||||||||||||||||| ||||
Sbjct 1125191 GCGAGGCCGCGGAGAACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGG 1125250
Query 72852 GTCGCCTCAAGCAGCGCAGCTACGAGACGAAGGAAGGCGAGAACCGGACGGTCATCGAGC 72911
| |||||| |||||| |||||||| || || ||||| || || ||| ||||||
Sbjct 1125251 GCCGCCTCGTCCAGCGCTCGTACGAGACCCGCGAGGGGGAGAAGCGCACCGTCGTCGAGC 1125310
Query 72912 TCGAGGTCGAGGAGATCGGCCCCGCGCTGCGGTACGCCACCGCCCGCGTGGTCCGAACTC 72971
| |||| || |||||||| ||| | ||||| |||||| | ||| || ||| |||
Sbjct 1125311 TGCAGGTGGACGAGATCGGTCCCTCCCTGCGCTACGCCTCTGCCAAGGTCACCCGCGCTC 1125370
Query 72972 CGCGCAACGGCGGCGGTGG 72990
|||| || ||||||||
Sbjct 1125371 AGCGCTCGGGTGGCGGTGG 1125389
>seq6
Length=371824
Score = 118 bits (130), Expect = 6e-22
Identities = 230/329 (70%), Gaps = 18/329 (5%)
Strand=Plus/Plus
Query 48908 CACCACAACTACACCGAGCGGGTCGAGA---TCGCCGGCAAGAAAGT-GTGGCTCACGCG 48963
|||||||||||| || | |||||| ||| |||| || | | || | | || ||
Sbjct 99005 CACCACAACTACGTCGCG---GTCGAGCACGTCGACGGCCAGGAGCTCGTCG-TGACCCG 99060
Query 48964 CAAGGGTGCAATCGACGCAAGCGAGGGTCGATAT-GGACTGATCCCCGGATCCATGGGCA 49022
|||||| || ||| || | |||| ||| | || || ||||| || ||||||||||
Sbjct 99061 CAAGGGCGCGATCCGGGCCGGGAAGGG-CGACCTCGGGCTCATCCCGGGGTCCATGGGCA 99119
Query 49023 CCAAGTCCTATGTCGTCCGCGGCAAAGGGAAT---GAGTCCGGCCTCTTCTCTGCGCCCC 49079
|| || || |||| ||||| ||||| ||||| | | || ||| | |
Sbjct 99120 CCGGCTCGTACATCGTGCGCGGGCTCGGGAACCCGGAGTCGTAC---TGGTCGGCGTCGC 99176
Query 49080 ATGGTGCCGGCCGTCAGTAT-TCGCGCACCCAGGCCAAGAAGCTGTTCACCCTGGATGAC 49138
| ||||| ||||||| | || |||||||| |||| |||||| ||||| || || |||
Sbjct 99177 ACGGTGCGGGCCGTC-GCATGTCGCGCACGAAGGCGAAGAAGACCTTCACGCTCGACGAC 99235
Query 49139 CTCGCCGACCGAATGAAGGGCATCGAATACCGCCACGGCGAAGAGTGGATCGACGAGATC 49198
||||||| || | || ||| | || | |||| | | || | | | |||||||||||
Sbjct 99236 CTCGCCGCCCAGACGACCGGCGTGGAGTGCCGCAAGGACGCCGGGGTGCTCGACGAGATC 99295
Query 49199 CCGGACGCCTACAAGGACATCGACCAGGT 49227
|||| ||||||||||||| ||||| ||||
Sbjct 99296 CCGGCCGCCTACAAGGACCTCGACGAGGT 99324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 299635733004364
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |