Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq13 477 6e-130 seq6689 215 3e-51 >seq13 Length=283376 Score = 477 bits (528), Expect = 6e-130 Identities = 589/799 (74%), Gaps = 10/799 (1%) Strand=Plus/Plus Query 782 ACACCCTACGAAGACCTGTTGCGCGACATCCTGGAGACTGGCAAGTCGAAGGATGATCGC 841 || || ||||| ||||| |||||||| |||||| | |||| | | |||| || ||| Sbjct 138341 ACCCCGTACGAGGACCTCCTGCGCGACGTCCTGGCGCACGGCACGCCCAAGGGCGACCGC 138400 Query 842 ACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGACCTCACCGAGGGC 901 || || || ||||||| ||| ||||||| |||||| || | ||||||| | ||||| Sbjct 138401 ACGGGGACGGGCACGCGCAGCGTGTTCGGCCGCCAGCTCCGCTTCGACCTCGCGCAGGGC 138460 Query 902 TTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTGCGTACGAACTTCTGTGG 961 |||||||| |||| ||||||||||| ||| |||| || || || ||||| || |||||| Sbjct 138461 TTCCCGCTCATCACGACGAAGCGCGTGCACCTCAAGTCCGTCGCCTACGAGCTGCTGTGG 138520 Query 962 TTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGGCGTCACCATCTGGGAC 1021 ||||| | |||||| |||||||| |||| | || |||||| |||||||||| Sbjct 138521 TTCCTGCGCGGCGACTCGAACGTGCGCTGGCTCCAGGAGCGCGGCGTGCGCATCTGGGAC 138580 Query 1022 GAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTGGCGGCACTGG 1081 |||||||||||||||| ||| | ||||| || |||||||||| |||||||| ||| Sbjct 138581 GAGTGGGCCGACGCCGACGGCGAGCTCGGCCCCGTCTACGGCGTCCAGTGGCGCTCGTGG 138640 Query 1082 CATGTCGAGGACGGAGGATCGTCGTGGATTGACCAGATCTCGGCCGCCGTGGAGCTGCTT 1141 | ||| | |||| | || | | | |||||| || || | | |||| | | Sbjct 138641 C----CGACGCCGGACGGCCGCCACG--TCGACCAGGTCGCGCAGGTGATCGAGCAGATC 138694 Query 1142 CGCGAGGACCCTGACTCGCGCCGGAACGTGGTATCCGCATGGAACGTCGGTGACCTCAGC 1201 | | | |||| |||||||| ||| || | || ||||| ||||||||||| || || Sbjct 138695 AGGGCGAACCCCGACTCGCGACGGCACATCGTCTCCGCGTGGAACGTCGGGGAGATCGAG 138754 Query 1202 GACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTCGACGGCCGGCTC 1261 |||||||| || | ||||||||| | |||||| | ||||| | ||||||||||||| Sbjct 138755 GACATGGCGCTGCCGCCGTGCCACGCGTTCTTCCAGTTCTACGTGGCCGACGGCCGGCTC 138814 Query 1262 TCGCTGCAGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGTTCAATATCGCC 1321 ||| ||| ||||||||||| |||||| | |||||||| ||||||||||| ||||| Sbjct 138815 TCGTGCCAGCTCTACCAGCGCTCGGCGGACCTCTTCCTCGGGGTGCCGTTCAACATCGCG 138874 Query 1322 TCGTACGCGCTCCTCGCGCACATGTTCGCGCAGCAGGCCGGCCTGCGGGTGGGTGAGCTG 1381 ||||||||||| |||| |||||| |||| |||| ||||||| ||| || || | Sbjct 138875 TCGTACGCGCTGCTCGTCCACATGGTCGCCGCGCAGACCGGCCTCGAGGTCGGCGACTTC 138934 Query 1382 ATCTGGACCGGCGGCGACTGCCACATCTACAACAACCACGTCGACCAGGCGCTGATGCAG 1441 | |||||||| |||||| ||||||||| ||||||||||||| |||| || |||| Sbjct 138935 GTGTGGACCGGAGGCGACGTGCACATCTACGACAACCACGTCGAGCAGGTGCGCGAGCAG 138994 Query 1442 CTCCGCCGACGA-CCGCGGCCCTACCCGAGGCT-CGTGCTACACCACGCGCCGTCGATCT 1499 ||| || ||| ||| || ||||||| ||| || | || |||| | |||||| Sbjct 138995 CTCACGCG-CGAGCCGTACCCGTACCCGACGCTGCGCCTCGCGCCCCGCGAC-TCGATCG 139052 Query 1500 TCGACTACCGGTACGAGCACATCCACCTCGTGAACTACGACCCGCACCCGTCGATCAAGG 1559 || |||| ||||||| ||||| | |||| ||| | | |||||| ||||||||| Sbjct 139053 ACGCCTACGAGTACGAGGACATCGAGGTCGTCGGGTACCAGCACCACCCGACGATCAAGG 139112 Query 1560 CGCCGGTGGCCGTCTGATG 1578 ||||| | || |||||||| Sbjct 139113 CGCCGATCGCGGTCTGATG 139131 >seq6689 Length=433 Score = 215 bits (238), Expect = 3e-51 Identities = 276/375 (74%), Gaps = 4/375 (1%) Strand=Plus/Plus Query 1149 ACCCTGACTCGCGCCGGAACGTGGTATCCGCATGGAACGTCGGTGACCTCAGCGACATGG 1208 |||| ||| |||| ||| || | || ||| ||| ||||||| || || ||||||| Sbjct 61 ACCCCGACGCGCGACGGCACATCGTCGCCGGGTGGGACGTCGGGGAGATCGAGGACATGG 120 Query 1209 CACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTCGACGGCCGGCTCTCGCTGC 1268 | || | ||||||| | | |||||| | |||| | |||||||||||||||| | Sbjct 121 CGCTGCCGCCGTGCCGCGCGTTCTTCCAGTTCTACGGGGCCGACGGCCGGCTCTCGTGCC 180 Query 1269 AGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGTTCAATATCGCCTCGTACG 1328 || ||||||||||| |||||| | |||||||| ||||||||||| ||||| ||||||| Sbjct 181 AGCTCTACCAGCGCTCGGCGGACCTCTTCCTCGGGGTGCCGTTCAACATCGCGTCGTACG 240 Query 1329 CGCTCCTCGCGCACATGTTCGCGCAGCAGGCCGGCCTGCGGGTGGGTGAGCTGATCTGGA 1388 |||| |||| |||||| |||| |||| ||||||| ||| || || | | |||| Sbjct 241 CGCTGCTCGTCCACATGGTCGCCTCGCAGACCGGCCTCGAGGTCGGCGACTTCGTGTGGA 300 Query 1389 CCGGCGGCGACTGCCACATCTACAACAACCACGTCGACCAGGCGCTGATGCAGCTCCGCC 1448 |||| |||||| ||||||||| ||||||||||||| |||| || |||||| | | Sbjct 301 CCGGAGGCGACGTGCACATCTACGACAACCACGTCGAGCAGGTGCGCGAGCAGCT-CACG 359 Query 1449 GACGA-CCGCGGCCCTACCCGAGGCT-CGTGCTACACCACGCGCCGTCGATCTTCGACTA 1506 | ||| ||| || ||||||| ||| || | || |||| | |||||| || ||| Sbjct 360 GGCGAGCCGTACCCGTACCCGACGCTGCGCCTCGCGCCCCGCGAC-TCGATCGACGCCTA 418 Query 1507 CCGGTACGAGCACAT 1521 | ||||||| |||| Sbjct 419 CGAGTACGAGGACAT 433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296096942432292