Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_031107.1 Length=246291 Score E Sequences producing significant alignments: (Bits) Value seq6689 87.8 3e-12 seq13 87.8 3e-12 >seq6689 Length=433 Score = 87.8 bits (96), Expect = 3e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 202490 CTTTCTTGTCAGCTCTATCAGCGTAGTGCGGACATGTTCCTTGGCGTACCGTTTAACATC 202549 || || || |||||||| ||||| |||||| | ||||| || || ||||| |||||| Sbjct 171 CTCTCGTGCCAGCTCTACCAGCGCTCGGCGGACCTCTTCCTCGGGGTGCCGTTCAACATC 230 Query 202550 GCGTCTTACGCCTTGCTGGTACACATGTTTGCACAACAGGCGAACATGGCGGTAGGCGAC 202609 ||||| ||||| |||| || |||||| | || ||| | | | | ||| |||||| Sbjct 231 GCGTCGTACGCGCTGCTCGTCCACATGGTCGCCTCGCAGACCGGCCTCGAGGTCGGCGAC 290 Query 202610 TTCGTCTGGACAGGTGGTGATACGCATCTGTACTCCAACCA 202650 ||||| ||||| || || || ||| | ||| |||||| Sbjct 291 TTCGTGTGGACCGGAGGCGACGTGCACATCTACGACAACCA 331 >seq13 Length=283376 Score = 87.8 bits (96), Expect = 3e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 202490 CTTTCTTGTCAGCTCTATCAGCGTAGTGCGGACATGTTCCTTGGCGTACCGTTTAACATC 202549 || || || |||||||| ||||| |||||| | ||||| || || ||||| |||||| Sbjct 138812 CTCTCGTGCCAGCTCTACCAGCGCTCGGCGGACCTCTTCCTCGGGGTGCCGTTCAACATC 138871 Query 202550 GCGTCTTACGCCTTGCTGGTACACATGTTTGCACAACAGGCGAACATGGCGGTAGGCGAC 202609 ||||| ||||| |||| || |||||| | || ||| | | | | ||| |||||| Sbjct 138872 GCGTCGTACGCGCTGCTCGTCCACATGGTCGCCGCGCAGACCGGCCTCGAGGTCGGCGAC 138931 Query 202610 TTCGTCTGGACAGGTGGTGATACGCATCTGTACTCCAACCA 202650 ||||| ||||| || || || ||| | ||| |||||| Sbjct 138932 TTCGTGTGGACCGGAGGCGACGTGCACATCTACGACAACCA 138972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 787909703420320