Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_031126.1 Length=244840 Score E Sequences producing significant alignments: (Bits) Value seq6689 86.0 1e-11 seq13 86.0 1e-11 >seq6689 Length=433 Score = 86.0 bits (94), Expect = 1e-11 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 200838 GCTTTCCTGTCAGCTGTATCAGCGTAGCGCTGATATGTTTTTAGGCGTGCCGTTCAACAT 200897 ||| || || ||||| || ||||| || || | || | || |||||||||||||| Sbjct 170 GCTCTCGTGCCAGCTCTACCAGCGCTCGGCGGACCTCTTCCTCGGGGTGCCGTTCAACAT 229 Query 200898 TGCATCATACGCACTACTGATTCACATGGTAGCCCAACAGGTCAATATGACTGTCGGTGA 200957 || || ||||| || || | |||||||| ||| ||| | | ||||| || Sbjct 230 CGCGTCGTACGCGCTGCTCGTCCACATGGTCGCCTCGCAGACCGGCCTCGAGGTCGGCGA 289 Query 200958 TTTCGTATGGACGGGTGGTGACGTACACATCTACAGCAATCACGAAGAGCAGGTTCG 201014 ||||| ||||| || || ||||| ||||||||| ||| |||| |||||||| || Sbjct 290 CTTCGTGTGGACCGGAGGCGACGTGCACATCTACGACAACCACGTCGAGCAGGTGCG 346 >seq13 Length=283376 Score = 86.0 bits (94), Expect = 1e-11 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 200838 GCTTTCCTGTCAGCTGTATCAGCGTAGCGCTGATATGTTTTTAGGCGTGCCGTTCAACAT 200897 ||| || || ||||| || ||||| || || | || | || |||||||||||||| Sbjct 138811 GCTCTCGTGCCAGCTCTACCAGCGCTCGGCGGACCTCTTCCTCGGGGTGCCGTTCAACAT 138870 Query 200898 TGCATCATACGCACTACTGATTCACATGGTAGCCCAACAGGTCAATATGACTGTCGGTGA 200957 || || ||||| || || | |||||||| ||| ||| | | ||||| || Sbjct 138871 CGCGTCGTACGCGCTGCTCGTCCACATGGTCGCCGCGCAGACCGGCCTCGAGGTCGGCGA 138930 Query 200958 TTTCGTATGGACGGGTGGTGACGTACACATCTACAGCAATCACGAAGAGCAGGTTCG 201014 ||||| ||||| || || ||||| ||||||||| ||| |||| |||||||| || Sbjct 138931 CTTCGTGTGGACCGGAGGCGACGTGCACATCTACGACAACCACGTCGAGCAGGTGCG 138987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783267054336000